Pteropus alecto (black flying fox): 102890706
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Entry
102890706 CDS
T02993
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102890706 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102890706 (CLP1)
Enzymes [BR:
pale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
102890706 (CLP1)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102890706 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
102890706
NCBI-ProteinID:
XP_006906079
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLRYGSKARARSFLFILGLWQEHRPTLALPDPTSAAERERAEQGGRGACGGRALLLRG
RTALLGGGSDDDGGGDGNRAGGEYRGHRPLRNRKCRASEMGGESDL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgatgacaaaaagccaacaactaaatttgaattagagcgagag
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctggctggc
atggcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gcgaaggtggctgttttcacttggcatggttgttctctacagctgagtggccgcaccgag
gtggcatatgtctccaaggacacccctatgttgctttacctcaacacacatacagccttg
gagcagatgcggaggcaggcggagaaggaagaagagcgaggcccccgggtgatggtagtg
ggccccactgatgtgggcaagtccacagtatgccgtctgctgctcaactatgcagtgcgt
ttgggccgccgacccacttacgtggagctggatgtgggccagggctctgtgtctatccct
ggtaccatgggggccctctacattgagcggccagcagatgtcgaagagggattctctatc
caagcccctttggtatatcattttggctcaaccactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcagatgtgttcaaccaaagatgtgaagtgaaccgaagg
gcttctgttagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gccttggtgcatgcagcctcagcctttgaagtggatgtggttgtggttctggatcaagaa
cgactgtacaatgaactgaaacgggacctccctcactttgtgcgcactgtgctgctccct
aaatcagggggtgtggtggagcgctccaaggacttccggcgggaatgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaag
ttttcagatgtgaaaatctacaaagtgggggcacctaccatcccagactcctgtttgcct
ttgggcatgtctcaggaagacaatcagctcaagctagtacctgtcacccctggccgagat
atggtacaccacctcctgagtgttagcactgctgagggcacagaggagaacctttctgag
actagtgtggctggcttcatcgtggtgaccagtgtggacctggaacatcaggtgtttacc
gttctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatctacgctacggctccaaggctcgcgcccgctctttcctcttcatcctgggc
ctttggcaggagcatcgccccacactggctcttccagacccgacgagcgccgccgagcgg
gagcgcgcggagcagggcgggcgtggagcgtgcgggggccgcgcgctgcttctcagaggc
cggacggcactgctgggaggcggcagcgacgacgacggcggcggtgacgggaaccgcgcc
gggggtgagtatcggggacaccggcccctgcggaaccggaagtgcagggccagtgagatg
ggaggggagagtgacctctag
DBGET
integrated database retrieval system
