Pteropus alecto (black flying fox): 102892338
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Entry
102892338 CDS
T02993
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pale04040
]
102892338 (SCN11A)
Ion channels [BR:
pale04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102892338 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
102892338
NCBI-ProteinID:
XP_006910851
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MDDWCYPVIFPDARNFRPFTSDSLAAIEKRIAIQKEKKELKDPTAAEPQPRPQLDLKASR
KLPKLYGDIPHELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRISVHSLFSMFIICTVIINCMFMAAARGGKNNSSIETDRAEYVFTSIYIFEALIKIL
ASGFILDEFSFLRDPWNWLDSIVIATAFVSCSPNIRLSDISLSSLRTFRVFRALKAISVV
SGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGNLNQMCVREDCKNATNLDD
YCYEKKDSTEFKICNSGRSDCSEKFECIHTQKNPDYGYTNFDNFGWSFLAMFRLMTQDSW
EKLYRQTLRTSGLFAVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAKEKMF
QEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFFRESEKEQVPG
SESDEDSPKKPYLLEQTKRLSQNLSVDFCEEHRDPLQRQRALSAVSILTITMQEQEKSQE
ACFPCGENLASRYLVWDCSPRWICFKKALRTVMTDPFTELAITICIIINTIFLAMEHHKM
DQSFERILYTGNLVFTGIFTAEMCLKIIALDPYHYFRRGWNVFDSIVALLSVTDVMMNKI
NVPLFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQMFG
SKFNSEKCPRRWHMGDFYHSFLVVFRILCGEWIENMWECMQNVGNAQLCIVVFLLIMVIG
KLVVLNLFIALLLNSFSNEERDGNSEGEAKKTKVQLALDRFHRAFCFVLHTLEHFCCKRY
RRQNLPKQKEVAGGSSAESKDVIPLVTEVKKGPETWEEFSVLTSAPKTLVVGHDWTWLAP
LAEEEDDIESPEEDNAQPVTQPEAGKQAHELHQEAKSSSPRVQNVEIDVFSEDDAYLSVQ
NPRKKSDAISVFSECSTIDLQDPFRRVPEMVPQKEPERCLPKGLGCCFPCCTVNKRKSPW
IIWWKLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVNLHKQPNIQALLNCTDNIFTF
IFIMEMGLKWVAFGFWKYFTSAWCWLDFIIVIVSVLNLTNLKVLKSLRTLRALRPLRALS
QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFSGKFGRCTNVTDNSSLVID
PKLVANLSQCESRNFTWVNLNVNFDNVGMAYLALLQVATFKGWMEIMYAAVDSNEKEDQP
VFERNKYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFLTEEQNKYYNAM
KKLGSKKPQKPIPRPLNKCQGLVFDLVTNQIFDVIIIILIILNMVSMMAESDNQSKTMSL
ILDYLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSMMISALEEQKHIP
FPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAIFGM
SWFCKVKPDSGIDDIFNFQTFAGSLLCLFQITTSAGWDTLLSPMLQSDDSCNSTSENCYL
STTAISYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFDPE
ATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVTGDRLHCLDILFAFTTRVLGD
SNGLDSMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKAFRKYMMKVTMSTL
EDRPRSPLQTPCNGSLSSSGVAEGKVHCD
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtgctacccagtgattttcccagatgcgcggaatttccgccccttcact
tctgactctctggctgcaattgagaagaggattgccatccaaaaggagaaaaaggagctc
aaagacccgacagcagcagaaccccagcctcgacctcagcttgacctgaaggcctccagg
aagttgcccaagctctatggtgacattccccatgagctgatagcgaagcccctggaagac
ttggacccattctacagaaaccataagacatttatggtgttgaacaaaaagagaacaatc
tatcgcttcagtgccaagcgcgccttattcatttttgggcctttcaattcaatccgaagt
ttagccattagaatctcggtgcattcattattcagcatgttcatcatttgcactgtcatc
atcaactgcatgttcatggctgcagctcgtggtgggaagaacaatagtagtatagagacc
gaccgtgctgagtatgtcttcactagtatttatatttttgaagctttgataaaaatatta
gcaagcggttttattctggatgagttttcttttcttcgagatccatggaattggctggac
tccattgtcattgcaacagcgtttgtatcatgttcaccaaacatcaggctcagcgacatc
agtctgtcatccctacgtaccttccgagtgttcagagctttgaaagcaatttcagtagtt
tcaggtctgaaggtcatcgtgggggccttgctgcgctctgtgaagaagcttgttgacgtg
atgatcctgactcttttttgcctaagtatcttcgcccttgttggtcagcagctcttcatg
ggaaatctaaaccagatgtgtgtcagggaggactgtaagaatgccactaacttggacgac
tattgttatgaaaagaaagattccactgaattcaaaatatgtaactccggtagaagtgac
tgttctgaaaaatttgaatgcatacacactcaaaagaatcctgactatggctatacaaat
tttgacaactttggctggtcatttcttgccatgttccggcttatgacccaagattcctgg
gagaagctttatagacagaccttacgcacctcggggctcttcgcagtcttcttcttcgtg
gtggtcatcttcctgggctctttctacctaattaatttaaccctggctgttgtcaccatg
gcttacgaagaacagaataagaacgtagctgctgagacggaggccaaggagaagatgttt
caggaagcccagcagctgttaaaggaagagaaagaggctctggttgccatgggaattgac
agaagttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctattt
ggtaacaggaaaaggaagtccttttttttcagagaatctgagaaagaacaggttccagga
tcagagtctgatgaggattccccaaaaaagccttacctcctagagcaaaccaaacgactg
tctcagaacctgtcagtggacttctgcgaagagcacagagaccctctccaaaggcagagg
gcgctgagtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaatcccaggag
gcttgcttcccgtgtggggaaaacctggcatccagatacctcgtgtgggactgtagcccc
cggtggatatgctttaagaaggccctgagaactgtgatgaccgacccctttactgagctg
gccatcaccatctgcatcataatcaatactatcttcttggccatggagcatcacaaaatg
gaccagagttttgagcgtattttgtatacaggaaatttggtgttcactggcatttttacg
gcagaaatgtgcctaaaaatcatcgcgcttgacccctaccactactttcgccgaggctgg
aacgtctttgacagcattgtcgctcttctcagtgttacagatgtgatgatgaataaaata
aatgtgccgctgttccattccctacgagtgctaagagtcttcaagttagccaaatcgtgg
ccaactttaaacacactgattaagatcatcggccactccgttggagccctgggaaacctg
accgtggtcctggccattgtggtctttattttctcagtagtcggcatgcagatgttcggc
tctaaattcaattccgaaaagtgtccacggcgctggcacatgggggacttttatcactct
tttctggtggtgttccgcatcctctgtggggaatggatcgaaaacatgtgggagtgtatg
caaaacgtcggtaacgcacagctgtgcattgttgtctttctgttgatcatggtgatagga
aagctcgtggtactcaacctcttcattgccttgctgctcaattcctttagcaatgaggag
agagatgggaactcagaaggagaggccaagaaaaccaaagtccagttagccttggatcgg
ttccaccgggctttttgttttgtgctacatactcttgagcatttctgttgcaagcggtac
aggaggcaaaacttaccaaagcagaaagaggtggcaggaggctcttctgcagagagcaaa
gatgtcattcccctggtcacagaagtgaaaaaaggcccagagacctgggaggagttcagt
gtcctaacttctgcaccaaagaccttggttgtcgggcatgattggacttggttggcccca
ctcgccgaggaagaagatgacattgaatctcctgaggaagataacgcacagcctgtcaca
caacctgaggctggaaaacaggcccatgagctccatcaggaagccaagtccagcagccca
agagttcagaatgtggaaattgatgtgttctcagaagacgatgcttatctgtcagtacag
aatccccgaaagaagtctgatgctatcagtgtattctcagaatgtagcaccatcgatctg
caagatccctttaggcgggtacctgaaatggttccccagaaggagccagagagatgtttg
cccaaaggcctgggttgctgcttcccatgctgtactgtgaacaagagaaagtccccctgg
atcatttggtggaaactgcggaaaacctgctaccaaatagtgaaacacagctggtttgag
agctttattatctttgtgattctgctgagcagtggggcactggtgttcgaagatgttaac
cttcacaaacaacccaatatccaagcattacttaattgtactgacaatattttcacattc
atttttatcatggagatgggtctgaaatgggtggcctttggattttggaagtatttcacc
agcgcctggtgctggctcgatttcatcatcgtgattgtgtctgtgctcaatctcaccaac
ttaaaggtcttgaagtccctccggactctacgggcactgaggcccctgcgggcactgtcc
cagtttgaaggaatgaaggtggtagttaatgctctcattggtgccatacctgccattctg
aatgttttgctcgtctgcctcattttctggctcatattttgtatcctgggagtaaacttg
ttttctggaaagtttggaaggtgcactaatgtaacagataactcgagcttggtcatagat
cccaaacttgttgcaaacctaagtcagtgcgaaagtagaaatttcacctgggtcaacctg
aatgtcaactttgacaacgtgggaatggcttacctcgccctgctgcaggtggcgacgttt
aagggctggatggagattatgtatgcagctgttgattccaacgagaaggaagaccagcca
gtttttgagaggaacaaatacatgtacctttacttcgtagtttttattatctttggctca
ttcttcactctgaatctctttattggtgttattatcgataacttcaaccaacagcagaaa
aagataagtggccaagacatttttttgacagaagaacagaataaatactataatgcaatg
aaaaaattaggatccaaaaaacctcagaagcccattccaagacctctgaacaaatgccag
ggtcttgtgtttgacctggtcaccaaccagatctttgacgtcatcatcatcatcctcatt
atcctcaacatggttagcatgatggccgaatcagataatcaatctaaaaccatgagtctc
atccttgactatctcaacctggcctttgtggtcatctttacaattgagtgtctcatcaaa
atctttgctttgaggcaatactacttcaccaatggctggaatttatttgattgtgtgatc
gtggtcctttctattgttagtatgatgatttctgccttggaagagcagaagcacattcct
ttccccccgacactcttcagaattgtccgcttggctcggattggcagaatcttgaggctc
gttcgggcagctcgaggaatcaggactctcctttttgctctgatgatgtctcttccctct
ctattcaacatcggtcttctgctctttctgattatgtttatctatgccattttcggtatg
agctggttttgcaaagtgaagccagactctgggattgatgacatattcaacttccaaact
tttgcaggcagcttgctctgtctcttccagataaccacgtcagcgggctgggataccctc
ctcagccccatgttacagtcagatgattcctgcaactccacgtctgagaattgttacctc
tctaccacagccataagctattttgtcagttacatcatcatctcttttctcattgttgtc
aacatgtatattgctgtgattttagaaaacttcaatacagccactgaagaaagtgaagac
cctttgggtgaagatgactttgaaatattctatgaagtctgggaaaaatttgacccagaa
gcgacacagtttatcaaatattctgccctttctgattttgctgatgcccttcctgagccc
ttgcgtgtggcaaagccaaataaatttcaatttctagtaatggacttgcccatggtgact
ggagatcgcctccactgcctggatatccttttcgctttcaccactagggtactcggtgac
tccaatggcttggatagcatgaaagcaatgatggaggagaagttcatggaagccaaccct
ttcaagaagttatatgaacccattgtcaccaccaccaagagaaaggaagaggagagatgc
gccgccgttattcagaaggcctttcgaaagtacatgatgaaggtgactatgagcaccttg
gaagacaggcctcgttcaccactccagacaccctgcaatgggagcttgtccagctccggg
gtggccgagggcaaggtccactgtgactga
DBGET
integrated database retrieval system
