Pteropus alecto (black flying fox): 102892616
Help
Entry
102892616 CDS
T02993
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pale04131
]
102892616 (VPS13A)
Membrane trafficking [BR:
pale04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102892616 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
102892616
NCBI-ProteinID:
XP_024907155
LinkDB
All DBs
Position
Unknown
AA seq
3158 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKIKVG
HIGNLNLKIPWKNLYSQPVVAVLEDIYLLIVPSSIIKYDPLKEEKQLLEAKRQELKRIEE
AKQKVADQEKHRVEKQDTFTEKLITQIIKNLQVKISNIHVRFEDDITNRGNPLSFGISLQ
NLSMQTTDQYWVPCLHDETDKLFRKLIRLDNLFAYWNVKSQLFYLNNYDDSLDNLKRGIV
DENIVPEGYDFVFRPISANAKLEMNRRSDFDFSAPKINLAVELHDIAIEFNKPQYFSAME
LLESVDMMTQNLPYRKFKPNVPLHYHAREWWAYAIYGILEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKLTNKKPSDELLNSLEELEKALDVFNITIVRQQAEVEVKKAGYRIYREG
TNYSEDNKGWFSWLWTWSESDTKQQQDVKPGSLEEMLTPEEKILLYEAIGYSETVVDPTL
PKTFEAMKFYVHLKSMSIVLREKRQKPELLDIVVEEFSTCIVQRPGAQAIKFETRIDSFY
VTGLPDSFTKPRLLSSLVDATSLFQITFETNPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLTQLTSVTLTKLEEFRDKTATGLLYVIETQRVLDLRINLKASYVIIPQD
GIFSPTSNLLLLDLGHLKVTSKSRSELSDMKQGGTKLEEIMHRAYDSFDIHLTSIQLLYS
RVGDNWKEARKLNVSTQHILVPLHFSVEFSKAMVFMDVRMPKFKIFGKLPLLSLRISDKK
LQGILELIESIPKPTPATEVPAPVKQFQVHKSTSLGASQIPQKMLPLLEIPCVEDDSDEE
FFDAPCSPLEEPDQLTKVKCYQQKKSQKLECTKNMIQYKIRFEVPEVLIQFYHLVGDCEL
PVVEIEVLGLGTEIELRTFDLKANAFLKEFCLKYPEYLDENKKPIYLITTLDNTMEDLLT
LEYMKAEKNVPNLKSTYNNVAQLLKVNFSSLDIHLHTEALLNTMNYFNNIIPQLEEKSAP
VHVVETEDKGEVIKKIASKRSKNEDLITLQILAELSCLQIFIQDQKRNISEIKIEGLDSE
VIVRPLVTEINAKLRNIIVLDTDVTAVYKKAVYITGKEVFSFKMISYMDATAGSTYTDMN
VVDMQVNLTVGCIEVVFVTKFLYSILAFIDNFQAVKXXXXXXXXXAQRSSRLALDVNIKA
PVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSNPPPVIDLITIKLSKMRLYRTKFI
NDAYQEVLDLLLPLNLEVIIERNLSWEWYQEVPCFNVNAQLKPMEFILSQEDITTIFKTL
YXXXXXXXXXXXXXXXXXXSXVSSGVINASHPSGGTTVVTAAVVEVHSHASQVKTTLNMS
FRTDYLTMILYSPGPEQTSFTDVRDPSLKLAEFKLENIISTVKMYTDDSIFSSFSLKNCI
LDDKRPHVRKATPRMIGLTVGFDKKDMMDVKYKKVRDGWVSDLVLQETYICASVEFLLTV
ANVFLEAYTTGTVVETNVQAWTAKEEVPIQEQDKWEINIIIKNPEIVFVADMTRNDAPAL
VVTTQCEIYWKGDLENNTMTATIKDLQMRACPFLPVKRKGKITTVLQPCDLFYQATQMGT
DPQMIDISVKSLTLKVSPVIINTVITITSALYTTKETIPQETASSIAHLWEKKDTKNLKM
WFLEEPNEVENIPPTAELVPKGETIRMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKN
WSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKKAIVES
DTEEENYRVPEYKTVISFYSKDQLNITLSKCGLVMLNNLVKAFAEAATGSSAAFVRDLAP
FIILNSLGLNITVLPSDSFSVLNVPMAKSYVLKSEESLSMDYVRTKDNDHFNAMTSLSSK
LFFILLTPANHSTTDKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGNKKVTVRSPMQ
MRNHFSIPLSVYEGDTLLGTASPGNEFNIPLASYRSLLSLKPEDKDYQMCEGIDFEEIIK
NDGTFLKKKCRPINPSKKPFIINVVPEKDDLTSLSVYSEDDWDLPYVLHLWPPVLLRNLL
PYKIAYYLEGIEHRVFTLDEGRSAQICTVQFDKARLHLKLLDYLNHDWKSEYHIKPNQQD
ISFINFTCVTDIEKTDLDIAIHVTYNPGQTIIAFHSPYWMVNKTGRMLQYKADGIHRKHP
PNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVKCKGLKIDYQVGVT
IDLSSFNITRIVTFTPFYMIENKSRYRIAVAEEGNDKWLSLDLEQCIPFWPEDASNKLLI
KVERSEGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLI
NHTKNDIIEYKQSSLSEIEDFLPPGKAVLYTWADPVGSRKLKWSCGKSHGEVTQKDDMMT
PINLGKKTIYLVSFFEGLQRIILFTEDPKVFKVTYESEKAELAEQEIVLALQDVGISLVN
NYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKEYTESSPSEDKVVEL
DTNIPVRFTPSGSNMKILQPHIIAIRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIP
GAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDL
GFVYALAELMTEAEVTEKTEVELFHKDIEAFQEEYKTVSLVDSSQVSLYEYFHISPLKLH
LSVSLSSGKEEAKDSEQHEGLIAVRSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTT
SELQSEVIRHYSKQAIRQMYVLILGLEVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEE
FVEGMALGLKALVGGAVGGLAGAASKITSAVAKGVAAMTMDEDYQQKRREAMNKQPAGLR
EGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGLVGAVARPTGGIIDMA
SSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYF
THVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYNFDEFTKEPFIVHGRRLRIEAKERV
KSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPSL
NT seq
9477 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgctgaatcggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccctgaagaat
cttgaaattaaagagaatgccctgagtcaactggatgtaccatttaaaattaaagttggt
catataggtaatcttaatcttaaaattccatggaaaaacctttattctcaaccagtcgtt
gctgtcttggaagatatttacttactcatagtgccttcttctataataaaatatgatcct
ttaaaagaagaaaagcaactcttggaagcaaagcgacaggaactaaaaagaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacatcgggtggaaaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatgtt
cgttttgaagatgatatcacaaatcgaggaaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgacgaaactgat
aaactatttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagctgttttaccttaataattatgatgactcattggacaacttgaagagaggtattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccctatatctgctaatgcc
aaacttgagatgaatcgtcgatctgattttgacttttctgcccccaagataaacctggct
gtcgagttacatgacatagcaattgaatttaataaaccacagtatttcagtgcaatggag
cttcttgaatcagttgatatgatgacgcaaaatcttccatataggaaattcaaacctaat
gtacctcttcactaccatgccagagaatggtgggcttatgctatatatggtattcttgaa
gtaaatgtttgcccccgcttacggatgtggtcatggaagcatattagagaacataggcaa
aaaatgaagcaatacaaagaactgtataaaaaaaagctaacaaataagaagccatctgat
gaacttctcaactctttggaggagttggaaaaagccctggatgtatttaatataactata
gtgagacaacaggcagaagttgaggtaaagaaagctggatacaggatttatagagaagga
acaaactattcagaggataataaaggatggtttagctggttgtggacttggtcagaatca
gatactaaacagcagcaagatgtgaaacctggaagtcttgaagaaatgttgacacctgaa
gaaaaaattttactctatgaagcaattggctacagtgaaacagtagttgatccaaccttg
ccaaaaacatttgaagccatgaagttttatgttcacttgaaaagtatgtctattgttcta
agagaaaaacgacaaaaacctgagctgttagatattgtggtagaagaatttagcacttgc
attgttcaaagaccaggagcacaagcaattaaatttgaaaccagaatagattcattttat
gttactggcttaccagacagtttcacaaaaccacgcctcctgtcatcattggtcgatgct
acatcactcttccaaattacatttgagacaaatcctttagatgaaactgttgctcaaagg
tgtatcatagaagccgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcagacccccaaaagaagtaaatctaacacagctcacttcagtgacattg
acaaaacttgaagaatttcgtgataagacagcaacaggtctattgtatgttattgaaaca
cagagagttcttgatctcaggattaatttgaaagcttcatatgttattatcccacaagat
ggaatttttagccctacatcaaatctgcttcttttggatcttggtcatttaaaggtgaca
agtaaaagtcgttcggaattatcagatatgaaacaaggtgggaccaagcttgaagagata
atgcatagagcttatgattcctttgatattcatcttacaagcatacagctactttacagc
agagttggtgataattggaaagaagcacgaaaactcaatgtatctacacagcatattttg
gtccctctgcacttcagtgtggaattctctaaggccatggttttcatggatgtaaggatg
cctaaattcaagatttttggaaagttgccactgctttctttacgaatctcagataaaaaa
ttgcaagggattttggaactgattgaaagcattccaaagcccacacctgcaactgaagta
cctgcccctgtcaaacaatttcaggttcataagtccacttctttgggagcatcacagatt
ccacagaaaatgcttcctctcttggaaattccatgtgtcgaagatgattcagacgaggaa
ttttttgatgcaccatgtagtcccttggaagaacctgatcagttaactaaagttaaatgt
tatcaacaaaaaaagtctcagaagctggagtgtacaaaaaatatgattcagtataaaata
aggtttgaagtgccagaggtattgattcagttttatcaccttgttggagattgtgaatta
cctgtggtagaaattgaggttttaggattgggcacagaaattgagcttagaacatttgat
ttgaaagccaatgcctttttgaaagaattctgcttaaaatacccagaatacttggatgaa
aacaagaagccaatctatttgattacaacactggataacacaatggaagatctgttgaca
ctagaatatatgaaggctgaaaagaatgtacccaacttgaaaagtacctataacaatgtt
gcacaactgcttaaggtaaatttttcctccttggatattcatttgcatactgaagcactt
ctaaatacaatgaattactttaataatattattccacaattggaagaaaaatcagcccca
gtacacgttgtggaaactgaagacaaaggagaggtcattaaaaaaatagcttcgaaaagg
tccaagaatgaagatcttattaccttgcagattttagcagaattatcatgtttacagatc
tttattcaagatcagaaacgtaacatttctgaaattaagatagaagggcttgattctgag
gtgatcgtgaggcctttagtaactgaaataaatgcaaagctaaggaatataattgttttg
gatactgatgtgacagctgtatacaaaaaggctgtttatataactggaaaagaagttttc
agcttcaaaatgatttcttacatggatgcaactgctggttctacatacacagatatgaat
gtggttgacatgcaagttaatttaactgttggttgcatcgaagtagtttttgtcacaaaa
ttcctatattctatattggcttttatagataattttcaagcagttaaancnnnnnnnnnn
nnnnnnnnnnnnntggcacaaaggagttctagattggcattagatgttaacatcaaagcc
ccagtggtggtcatcccacaatctccagtttctgaaaatgtttttgttgctgattttgga
cttattacaatgacgaacacattccatatgataacagagagccagagcaaccccccaccc
gttattgatttgataacgataaagctgagtaaaatgcgactataccggactaaatttatt
aatgatgcttaccaggaggtactggatctattactgccattaaatcttgaagtgataatt
gagcgaaatttatcttgggaatggtaccaggaagttccttgttttaatgtaaatgctcag
ctaaagcccatggagtttattcttagtcaagaagacataacaactatttttaaaacatta
tatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaagt
nnagtgtctagtggagttattaatgcttcacatccttctggaggaacaactgtagtgaca
gctgctgtggtagaagtacattcacatgcctctcaagttaagacaacattaaatatgagt
ttcagaactgattatctcaccatgatactgtatagtccaggtcctgaacagacttccttt
acagatgttcgtgatccttctctgaaacttgctgagtttaagttggagaatataataagc
actgtaaaaatgtatacagatgactcaatattttcttcgttctcattaaagaactgtatt
ttagatgataaaaggcctcatgtcaggaaggcaactcctagaatgataggactgacagtt
ggatttgacaaaaaagacatgatggatgtaaagtataagaaagtcagagatggttgggtg
tctgatttagtccttcaagaaacctatatatgtgcaagtgtggaatttctgctgacagtt
gcaaatgtctttcttgaagcgtacaccacaggaactgttgtggaaaccaatgttcaagca
tggactgcaaaggaagaagtacctatacaggaacaagataagtgggaaattaatattatt
attaaaaatcctgaaattgtgtttgtggctgatatgacaagaaatgatgctcctgcctta
gtcgttacaacacaatgtgaaatttattggaagggcgaccttgaaaacaatacaatgact
gctactattaaagatctccaaatgagagcatgcccatttcttccagtcaagagaaaaggc
aaaatcactactgttttgcagccctgtgacttgttctatcaagctactcagatgggtaca
gatccacaaatgattgatatatcagtaaaatctctgacactaaaggtttcaccagttatc
ataaatactgtgattaccataacttcagcactttatacaactaaggaaaccattccacaa
gaaactgcttcttctatagcacatttatgggaaaagaaggatacaaagaatttaaaaatg
tggtttcttgaagaaccaaatgaagttgaaaacatacctcccacagctgaattggtaccc
aaaggagagacaataagaatgaacattgattctattttcatagttcttgaggctggaatt
ggtcatagaacagtccctatgcttttggcaaaatcgcgtttttcaggggaaggcaaaaac
tggagttccctcataaatctccactgtcagcttgagctagaagtacattattacaacgaa
atgtttggcgtctgggagcctttgcttgaacccttagaaattgatcagactgaggatttt
agaccgtggaatcttggaatcaagatgaaaaagaaagcaaaaaaggccattgttgagtca
gatactgaagaagaaaattatagagtgccagaatataaaactgtcatcagtttctattca
aaagaccaactaaacattacattatccaaatgtggtcttgtaatgttaaataatttagtc
aaggcatttgcagaagctgccactggatcttcagctgccttcgtaagggatctagcacca
tttataattttaaattctcttggacttaatatcactgttttaccaagtgattcttttagc
gtactcaacgttccaatggcaaaatcatatgtattgaaaagtgaggagagtttaagtatg
gattatgtccgaactaaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaa
cttttcttcattcttcttacacctgctaatcactctactactgataaaattcctttaaca
aaagtgggacgacgactatacactgtaagacacagagaatctggagttgaaaggtctatt
gtttgccaaattgatacagtggaaggaaataagaaggtaacagttcgatccccaatgcag
atgagaaatcatttttcaatcccactttctgtgtatgaaggagatactttattgggaaca
gcttcacctggaaatgaatttaacataccattagcatcttaccgatcactcctttctctg
aagccagaagacaaggactatcaaatgtgtgaaggaatagactttgaagaaattattaaa
aatgatggtacttttctaaagaagaaatgtagacctataaacccttccaagaaaccattc
atcattaatgttgtcccagaaaaagatgacttgacatctctgtcagtgtattccgaagat
gattgggacttaccatacgtattgcatctttggccacctgtcctactccgaaatcttctt
ccttacaaaattgcttattacttagagggaattgaacatagagtttttactttggatgaa
ggacgttctgcccagatttgtactgtgcaatttgataaagcccggctacatttaaaatta
cttgactatcttaatcatgattggaaaagtgaatatcatataaaacctaatcaacaagat
ataagtttcatcaactttacatgtgttacagacatagaaaagactgatttagatattgct
atccatgtgacttataaccccggccagacaattatcgcatttcacagtccttactggatg
gtcaataaaactggtcgaatgttacaatataaagcagatggaattcatcgaaagcatcca
cctaattataaaaagccagttctcttttcttttcagccaaagcatttttttaataacaat
aaggttcagcttatggtaactgatagtgaattgtcagatcagttttcaattgatactgtt
ggtagtcatggagctgttaaatgtaaaggtctgaaaatagactatcaagttggtgtcact
atagacctcagcagttttaacattaccagaattgtgacatttacccctttttatatgatt
gaaaacaaaagccgatatcgtatagcagtggctgaagagggaaatgataaatggctttct
cttgatttggagcagtgtatccccttttggcctgaggatgcttcaaataaacttcttatt
aaagttgaaagaagtgaaggccctcccaaaaagatacattttaacaagcaagaaaattgt
attttattgcgtctggataatgagcttggaggtattatagcagaagttaatctggctgag
cattctacagttattacattttcagattatcatgatggagcagctacattcctgttaata
aatcacaccaagaatgacattattgaatacaagcaaagttctctcagtgaaatagaagat
ttcctccctcctggaaaagcagtattatatacatgggctgatccagtgggctctagaaag
ctgaaatggagttgtggaaaaagccacggtgaagtaacacaaaaggatgatatgatgaca
cctataaatttggggaaaaagactatttatttagtttcattctttgaaggcttacagcgc
attattttattcactgaagatccaaaggtatttaaagtgacatatgaaagtgagaaagca
gagttagcagagcaagaaattgtgttggcattacaagatgttggaatttctctcgtcaac
aattacacaaagcaagaagtagcctatattggcattacaagttctgatgtggtttgggag
acaaagcccaagaagaaagcaagatggaagccgatgagtgtaaagcacactgagaagtta
gagaaagaatttaaggaatatactgaatcttcaccttcagaagataaggttgttgagttg
gacactaacattccggttcgcttcacacctagcggtagtaacatgaaaattctacaacca
catataatagctatacgaagaaattatcttccagcattaaaagtggaatataacacatct
gcacatcagtcatcatttagaattcaaatatacagaatacagatccagaaccagatacca
ggtgctatatttccctttgtgttttatcctatcaaacctcccaagtcggtcaccatggat
tcagcaccaaagccctttacagatgtcagtattgtcatgagatctgcagggcactcccag
atatcacgtattaagtacttcaaagtgttgatacaagaaatggatctcaggttagatctt
gggtttgtctatgctttagcagaacttatgacagaagccgaagtaactgaaaaaacggag
gttgaactttttcataaagatatagaagcttttcaagaagaatataaaacagtttcatta
gtagattcatcacaagtcagtctctatgaatactttcatatatctcctctcaagttgcat
ttaagtgtttcactgagttcgggtaaagaagaagctaaagattcagaacaacatgaagga
ttgatcgcagttcgttctttaaatcttttgctgaagagcattggtgccactcttacagat
gtgcaagatgtagtttttaaacttgcattttttgaactcaactatcagtttcatacaaca
tctgaactacagtctgaagtaataagacactattcaaaacaggccattaggcagatgtat
gtactcattcttggacttgaagttttgggaaatccctttggcttgattagagaattttcc
gaaggcgtagaagcatttttttatgaaccttaccagggagccatccaaggtccagaagag
tttgtggaagggatggcactaggactgaaggcattagttggtggagctgttggcggatta
gctggtgctgcctccaaaatcaccagtgctgtggctaaaggagtagcagccatgaccatg
gatgaagactaccaacagaaaagaagagaagccatgaataagcaaccagccggtctcaga
gaaggcatcactcgtggaggaaaaggcttagtttctggtttcgtaagtggcataacagga
atcgttaccaaaccaatcaaaggagcccaaaaagaaggagcaactggtttctttaaaggt
gttgggaaaggtttagttggagcagttgcaagaccaactggaggcatcatagacatggct
agcagtacatttcagggaataaaaagggctacagagacttctgatgaagtggagagtctg
cgaccccctcggttctttaatgaagatggagttatcagaccttacaggttgagggatggt
actggaaatcaaatgttacaggtcatggaaaatggaagatttgcaaaatacaaatatttt
acccatgtcatgatcaataaaacagatatgttaatgataaccaaaagtggtgtattattt
gtaacaaaaggaacatttggacagcttacatgtgagtggcagtacaattttgatgagttt
accaaagagccatttattgttcatgggagaagattgcgcattgaagcaaaggaacgggtg
aaatctgtattccatgccaaagagtttggaaaaataattaacttcaagaccccagaggat
gctaggtggatcctcacaaagctagaagaagcaagagaaccttccccgagcctctga
DBGET
integrated database retrieval system
