Pteropus alecto (black flying fox): 102892618
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Entry
102892618 CDS
T02993
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03030
DNA replication
pale03410
Base excision repair
pale03420
Nucleotide excision repair
pale03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102892618 (RFC1)
03410 Base excision repair
102892618 (RFC1)
03420 Nucleotide excision repair
102892618 (RFC1)
03430 Mismatch repair
102892618 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pale03032
]
102892618 (RFC1)
03400 DNA repair and recombination proteins [BR:
pale03400
]
102892618 (RFC1)
DNA replication proteins [BR:
pale03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102892618 (RFC1)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102892618 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
RuvB_N
AAA_30
Rad17
AAA_33
AAA_16
AAA_7
AAA_18
AAA_17
nSTAND3
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
SKI
Motif
Other DBs
NCBI-GeneID:
102892618
NCBI-ProteinID:
XP_015450392
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MSRFFVIQDIRKFFGVIPSEKKPASETVKKNEKTKSAEETFKAKKGIKEIKVNSSCKEDD
SKQKQPNKKKRVIYDSDSESEETVQVKNAQKEPEKLSLSPKPGKIIRTDPVTYISETDEE
DDFVCKKAASKSKENGGSTNSYLGATNMKKNEENIKTKNKPLSPIKLTPTSVLDYFGTGS
VQRSDKKMVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAEIRKAYLSSIPNQLERQLHE
DEEFARTLAMLDEEPKNKKARKDQEERETFSSVQANLHKTEKHKSPYKVKTEQFLDERKN
YSPKKQTKHESSKESQQYSKSSPYKIRKTSSPKASSKLTLLKKKGESSSKETEPMSSKRK
ENAIELKETKTPKKTKSSPAKKESVSPEDSEKRRTNYQAYRSFLNREGPKALGSKEIPKG
AENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKA
AALGTKIIDEDGLLDLIRTMPGKKSKYEIAVEAEMNKGKSRLQRTPQKNEQGKRKISPTK
KESESKRSRLTPKRGSSLNSVKKETSVFRRGLDFKEQEAEDTGGNSWARNWADDSSENKV
ENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWHKRPSEDKKHAKFGKFAGKDDGS
SFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIRGF
YSSGAAHSVSTKHALIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS
LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWC
ARSKALTYDQAKADSHRAKKDIKLGPFDVARKVFATGEETAHMSLVDKSDLFFHDYSIAP
LFVQENYLHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYAS
VLPGELMRGYMTQFPSFPSWLGKHSSTGKHDRIIQDLALHMSLRTYSSKRTINMDYLSHI
RDVLVQPLISQGVEGVQDVVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAF
TRAYNKEIHLTPYSLQAVKTSRHSTGPALDSEYNEELNEDDSQSDEKDQDTTETDAMIKK
KTKSSKSSKSEKDKESRKGKGKSSKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttcttcgttattcaggatattcggaaattctttggggttatcccaagtgaa
aagaaacctgcaagtgaaacagtaaagaagaatgagaaaacaaagtctgctgaagaaact
ttcaaagcaaagaaaggaataaaggaaatcaaggtaaatagttcttgtaaagaagatgac
tctaaacagaagcaaccaaacaagaaaaagagggtcatctatgattcagattcagaatca
gaggagacagtgcaggtaaaaaatgcccaaaaggaaccagaaaaattgtcattgtctcct
aaacctggtaaaattatacggacggatcctgttacatacatttcagaaacagacgaagaa
gatgacttcgtgtgtaagaaggcagcctctaaatcaaaagagaatggaggatccacaaat
agttatcttggagcaacaaacatgaaaaagaatgaagaaaacattaagaccaagaataag
cctctatcaccaataaaacttacccccacatcagtgcttgattattttggaactggaagt
gtccaacgatcagataagaagatggtggcaagcaaaagaaaagagccttcacaaaatgca
gatgattccaggttaaatgatgaagctatcgcaaagcaattgcaacttgatgaagatgca
gagatacggaaggcttacctgtcatccattccaaaccagctggagagacaattgcatgaa
gatgaagagtttgctagaacattagccatgttggatgaagaacctaagaacaaaaaggct
cgaaaggaccaagaagagagagaaacgttttcatctgtccaagccaatttacataaaaca
gaaaaacataaatctccttataaagtgaaaacagaacaatttctggatgaaaggaagaac
tacagtcctaagaaacaaactaaacatgaaagctcaaaagaatcccagcagtattccaag
tcatcaccttacaaaataagaaaaacttcttctcctaaagctagttccaagctgacgctt
ttgaaaaaaaaaggagagagttcttctaaagaaacagagcctatgtcctcaaaaagaaaa
gaaaatgccattgaattgaaagagacaaaaactcctaagaagaccaaaagttctccagct
aaaaaagagtctgtaagtcctgaagattctgaaaagagacgcactaattatcaagcttat
cgaagtttcttaaatcgagaaggtcccaaagctctgggctccaaagaaattccaaaggga
gctgaaaattgcttggaaggccttatatttgtaatcacaggagtgctggagtccattgaa
agagatgaagccaagtctttaattgaacgttatggaggaaaagtaactggaaatgtcagc
aagaaaacaaactaccttgtcatgggtcgtgatagcggacagtccaagagtgataaggca
gcagctttggggacaaaaattattgatgaagatggcctattggatctgattcgaactatg
ccaggcaagaagtccaaatatgaaatagcagttgaagctgagatgaataaaggaaagtcc
agattgcaaagaacaccacaaaaaaatgaacaaggaaaaagaaaaattagtccaaccaag
aaggagtcagaatccaaaaggagcagactgactcccaaaaggggcagctctctaaattca
gtaaaaaaggaaacaagtgtgtttcggagaggcctggacttcaaggagcaggaggctgag
gacacaggcggtaacagctgggctaggaattgggctgatgacagcagtgaaaacaaagtg
gaaaatttgctctgggttgataaatataagccaacctcactcaagaccataattggacag
caaggtgaccagagctgtgccaacaaacttctacgctggctccaaaactggcacaagaga
ccatctgaagataagaaacacgcaaagtttggtaaatttgccggcaaagatgatggctct
agttttaaagcagcattgctctcaggccctccaggtgttggcaaaacaaccacagcctct
ctggtctgtcaggaattgggatatagctacgtggaactgaatgcaagtgatactcggagt
aagaacagtttgaaggagattgttgctgagtcacttaataataccagcatcagaggcttt
tattcaagtggagcagcccattcagtaagcacgaaacacgctctcatcatggatgaagtg
gatggcatggcgggcacggaagacaggggaggaattcaggaattaattggcctgataaaa
catacaaaaattcccattatttgtatgtgcaacgatagaaatcatcccaagattcgctct
ttggttcattattgttttgaccttcgttttcaaagacctcgggttgaacagataaagggt
gcgatgatgtctattgcatttaaagagggtttaaagattcctcctccagctatgaatgaa
ataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtggtgt
gcacgaagtaaggcgctaacctatgaccaggccaaggctgattctcatagagccaaaaag
gatatcaaactgggcccatttgatgtagcccggaaagtgtttgcaactggagaggagact
gctcacatgtcacttgtggacaaatcagatctcttttttcatgattattcaatagcgccc
ctctttgtccaggagaactacttacatgtgaagcctgtagctgcagggggtgacatgaaa
aagcacttgatgcttttaagcagagcggcagatagcatatgcgacggtgacctagtggac
cgtcagatccggagtaggcaaaactggagtcttctgccgacacaggccatttatgccagt
gttcttccaggagagttaatgaggggttacatgactcagtttcccagcttcccgagctgg
ttgggtaagcactcatctacaggcaaacacgatcggattattcaggacctggcattgcat
atgagtctcagaacttactccagcaaaaggactatcaatatggattatctgtcacatata
agggatgtacttgtacagcccttgatctcacaaggggtagaaggagtacaggatgttgtt
gctcttatggacgcatattatttgatgaaagaagactttgagaatatcatggaaattagc
agctggggaggcaaacctagccccttctccaagctggatcccaaggtgaaagctgccttt
acaagagcttacaataaggaaatccaccttactccgtattcacttcaggcagtaaagaca
tcaagacacagcacaggcccagcactggattctgagtataacgaagagttaaatgaagat
gactctcagtctgatgagaaagatcaagacactacggaaactgatgctatgatcaagaaa
aagacaaaatcttcaaagtcttcaaaatcagagaaagataaggaatccagaaaaggaaaa
ggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
