Pteropus alecto (black flying fox): 102892842
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Entry
102892842 CDS
T02993
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X2
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102892842 (HELZ)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102892842 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102892842 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_16
AAA_22
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
102892842
NCBI-ProteinID:
XP_015445221
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQPVSNILAKSLT
GESLNGMVTKDLTRLKTLLTETETATGNVLSRYHMEDLEEGSCNGWRFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNEVLFPDITMTPTIPWSPNRYKKEIARQWDEQLDPRLNAKQKEAVLAI
TTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHP
YVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLN
TSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSE
FARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPA
HKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVV
TPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKE
QLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHE
NNSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQPSGSATKLQQSPPKGKNL
HHTQNDHFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSIL
YVPAVYGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGL
GHHPPVSIGQPQNQHQEKDQHEQNRNGKSDTNNPGPEINKIRTPEKKPTESKQIDLESNP
HNRSPESRPGVVYPNTKFHRKDNLNPRHINLPLPAPHTQYAIPSRHFHPLPQLPRPPFPV
PQQHGLLNQQQSNLPEQPNQMPPQPNQVVQQQNPLNQLTQQPPPQLSPAYQAGPNSAFFN
NAVSHRPQSPPAETVIPEQQPSPMLQEGHSPLRAITQPGPILPSHLNNFTDENPPGLPIG
EALDRVHGSVALETLRQQQVRLQQWNEHHAYLSQGSIPYPHHPHPHPHPHLQHLPQPPTG
LHQPPVRADWKLPSSAEDEAEAADSRFQDLLRELSNRDQSDTRELAEMPPPQSRLLQYRQ
IQTRSPPAVPSPPSSTDHSSHFSNFNDNSRDVEVANNPAFPQRLPPQIFSSPFSLPSEHL
APPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPF
HPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSSPQDSLAQCKERQD
HSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKAGRPPEDHLKSENL
EVSSSFNYNVLQHLGQFPPLMPNKQIVESANSSGQQSCGGGKPAMSYASALRAPPKPRPQ
PEQAKKSSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgtgaatcactcaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttctcttggccagtactcc
atggccgacttcacagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttatagaattgcctcatttttgcagctgaaaaactatgggcaagctgatgaagactgt
aggcacgtgctaggagaaggacttgccaagggagatggcgcctttcaggcagtgctttgt
tgcatgcagctgaaaggaaagctccagcctgtatccaacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactaaaaacacttctcaca
gaaacggagacagcaactggtaacgtcctgtctagatatcacatggaagacttagaagag
ggatcttgtaatggttggcgtttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcataatcctgatctttcagttactgtcaacaccaaaaaatctcaccagaca
tggacttttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttctagacaaatcattgaccaagaccaactatcagtcacggttg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaaattcaacctt
aaagtgcagttgcagattctagcaagcttcatgctcactggagtttctggaggtgcgaag
tatgctcagaatggacaactctttggtcgctttaagcttacggaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcagttgaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatgaggttttatttccagacatc
accatgactccaactataccatggagtcccaacaggtacaaaaaggagatagctcgacaa
tgggatgaacagttggatcctcgactaaatgcaaaacagaaagaggcggttctggccatt
acaactccactttcaatacagctgcctcctgttctcatcatcggaccctatgggacaggc
aaaacgttcactctagctcaggccgtaaagcacatcctccagcagcaggagacgaggatt
ctcatttgcacccattctaatagtgctgctgatctctacataaaggattatttacatcca
tatgtagaagcaggcaatccccaggcaagacctctcagggtatatttcagaaatcgctgg
gtaaagactgttcacccagttgtgcatcagtactgtttgatctcaagcgcacattccacc
tttcagatgccacagaaagaagatattcttaagcaccgagtggttgttgttacgttgaat
acttcccagtacctctgtcagttggaccttgaacctgggttttttacgcacatcctatta
gatgaagctgcccaggccatggagtgtgaaactattatgcctctagcattagcaactaaa
aatacgcggattgtcttggctggtgaccacatgcagctcagtccttttgtttacagcgag
tttgccagggagagaaaccttcatgtttcattacttgatcgactctatgagcattaccct
gccgagtttccatgtaggatcctgctatgtgagaactaccgctcccatgaagctatcatc
aattacacctctgagctcttctatgagggcaaactgatggccagtggaaagcaaccagca
cacaaggatttctacccactaactttctttacagcacgaggggaagatgtacaagagaaa
aatagcacagctttttataataatgcagaggtattcgaggtggtggaacgtgtggaagag
ttaagaaggaagtggccagtagcgtgggggaagttagacgacggcagtattggtgtggtg
actccatatgctgatcaggtgtttaggatacgcgctgaacttcgaaaaaagaggttatct
gatgtcaatgtagaacgggtgctaaacgttcaaggaaagcaattcagagttttgtttctt
agcacagtacgtacaaggcatacttgtaaacataaacagacaccaattaaaaagaaagaa
caactgctggaagattccacagaggacttagattacggttttttatctaactacaaactt
ctcaatactgccatcacaagagcacaatccctggttgctgtggtgggtgatcccattgct
ctgtgctctattggaagatgcaggaaattttgggagcggtttattgccctctgtcatgaa
aataatagcctgcacggaatcacttttgaacagatcaaagctcagctagaggctttagag
ctaaagaagacatacgtgttgaatcccctggcacccgagttcatcccacgggctctgaga
ctgcagccttcaggaagtgccaccaagctgcagcagtcaccccccaagggaaaaaacctc
catcatacccagaatgatcatttccagaatgatggaattgttcaacccaacccttccgta
cttattggcaatcctattagagcatatactcctccaccccctcttggacctcacccaaat
ttggggaaatctccaagccctgttcagagaatagatcctcacactgggacaagtattctt
tatgtacctgctgtctatggagggaatgtagttatgtcggtgcctttacctgtaccatgg
acagggtaccagggtaggtttgcagttgatcctcgaatcattacccaccaggcagcgatg
gcctacaacatgaacctcttacagacacatggacggggatctcctataccttacggcctt
gggcaccatccacctgtcagcatagggcaaccacaaaaccagcatcaggagaaggatcaa
catgagcaaaatcgaaatggtaaaagtgatacaaataatccaggacctgaaattaataag
attcgaacaccagagaaaaagcctacagaatcaaaacagattgatttggagtcaaatcca
cataacagaagtcctgaatcacgtcctggtgttgtttatcccaatactaaatttcatcgc
aaagataatctcaacccaagacacataaatcttcctcttcctgctccccacacacaatat
gcaatccccagtcgtcattttcatcctctcccccagctgccaagaccaccgtttccagtt
ccgcagcagcacggcctgttaaatcagcagcagagtaatttgcctgaacaaccaaatcaa
atgccaccccaaccaaatcaggtggtccagcagcagaatcctttgaatcagctgactcag
cagccacctcctcaactttctcctgcctatcaggcaggacccaacagtgctttttttaat
aatgcagtttctcatcgaccacagtcccctcctgcagagactgtgattcctgagcagcag
ccctctcctatgctgcaagaaggccacagtcccctgcgagccatcacacagcctggcccc
attcttccttcacatctgaataacttcactgatgagaaccccccgggattgcctataggg
gaggctttagatcgtgtgcatgggagtgtggctctggaaacgttgaggcagcagcaggtg
cggttacagcagtggaatgagcatcacgcctatctcagccagggcagtattccttaccca
caccatccccaccctcatccccatcctcacctccagcaccttcctcagccacccactgga
ttacatcagcctccagtgagggcagactggaagctccccagcagtgccgaagatgaagca
gaagcagcagactcgaggtttcaagacttactcagagaactgtctaatcgtgatcaaagt
gacacacgggaactcgctgaaatgccaccacctcaatcaagacttttgcaatatagacaa
attcagactaggagcccaccagcagtcccatctcccccatccagtacagaccacagtagc
cacttttctaactttaatgacaacagcagagacgttgaagtagccaacaacccagcattt
ccacagcgcctaccaccccagattttcagctcgcctttctcgttgccatctgaacacctt
gcccctcctcccttgaaatacctggcacctgatggagcatggacttttgctaacttacaa
cagaatcacctaatggggccgggttttccctatggcctacctccattgcctcacaggcca
ccgcagaacccttttgtacaaatacagaatcatcaacatgctattggtcaagagccattt
cacccattgtcatctcgaactgtatcttcttcttcgctccctagcttagaagagtatgaa
cccagaggacctggtcggcccttgtaccaaagaagaatctcatccagctcagtccagcct
tgttctgaagaagtgagctctcctcaagacagccttgctcagtgtaaagagcgccaggac
catagcaaccaatcttctttcaacttttcatccccggagtcctgggtaaacaccacctca
tccaccccctatcagaacattccgtgcaatggatctagcaggacagctcagcccagagag
ttgatagctccccccaaggccggcagaccccctgaggatcacctgaagtctgaaaacctt
gaggtgtccagttctttcaactataacgtgctgcagcatctcggccagtttccccccctc
atgcccaataagcagatcgtggagtcggctaacagcagcggccagcagagctgcgggggt
ggcaaacccgccatgtcctacgccagtgctctgcgggccccacccaagcccaggccccag
cctgagcaggccaagaagagtagcgaccctctttctctgttccaggaacttagcctgggg
agctcatcgggcagcaatggcttttactcctattttaaataa
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integrated database retrieval system
