Pteropus alecto (black flying fox): 102893717
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Entry
102893717 CDS
T02993
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102893717 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102893717 (BARD1)
04121 Ubiquitin system [BR:
pale04121
]
102893717 (BARD1)
03036 Chromosome and associated proteins [BR:
pale03036
]
102893717 (BARD1)
03400 DNA repair and recombination proteins [BR:
pale03400
]
102893717 (BARD1)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102893717 (BARD1)
Ubiquitin system [BR:
pale04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102893717 (BARD1)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102893717 (BARD1)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102893717 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
ANK_LRRK2
RTT107_BRCT_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102893717
NCBI-ProteinID:
XP_006906820
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MLGNRRPRVRSGNQPXPAMEPASGGAWAHSRAALDRLEKLLRCSRCANILREPVCLGGCE
HIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLQNLLRENELSDLKEDT
SRKSSFNDAENKKNSIKMWFSPRSKKVRYVVNKISVQTQPQIINEQNAQQASMYEYVSTS
PPVDVSARGKKASTRSGKKHKKKTLAQVNQEWNLEADKKDGELDSKEEFKEKLVSFCSQP
SVIASPQINGEIDLLASGSVADSECFGSVTEISLPLAEQIESPEIKSKNEVVTPEKNCCE
NCLPSKKSVPLGRKGKRGLHRRLPNPSSKRCRSSIPSTSGHFVKQTALSENTSLPGCSLP
PSSKVKVGGPLRRKNSDILDDSISPSPGLPPSTLNSPSYRRMMSSPSAVKLLPNSLMAMK
RNHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACSHGHLKVVELLLQH
KALVNTTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDCTDSENMKSLL
LLPEKNESSSTSHCSVMHTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCTEFDST
VTHVIVPGDKVQSTLKCMLGILSGCWILKFEWVKACLQRKEYEQEEKYEIPEGPQRSRLN
REQLLPKLFDGCYFYFGGAFKHHPKDNLIKLVTAAGGQILSRKPKPDSDVTQTINTVAYH
AKPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaaccgccggccgagggtccgctcggggaaccagccgncacccgccatggag
ccggcgagtggcggggcctgggcccacagccgcgccgcgcttgaccggctggagaagctg
ctgcgctgctcgcgttgcgctaatattctgagggagcctgtgtgtttaggaggatgtgag
cacatcttctgtagtaactgtgtaagtgactgcattggaactggatgtccagtgtgttat
actccagcctggatacaagatgtgaaaataaatagacaattggacagcatgatccagctt
tgtagcaagcttcaaaatttgctacgtgagaatgagctttcagatttaaaagaagataca
tctaggaaaagttcatttaatgatgcagaaaataagaagaattcaataaaaatgtggttt
agtcctcgaagtaagaaggtcagatatgttgtgaataaaatttcagtgcaaacccagcct
caaattataaatgaacaaaatgctcagcaggcctcaatgtacgaatatgtttctacaagt
cctccagtagatgtctctgcgagaggtaaaaaggcttccacgagatctgggaaaaagcac
aaaaagaaaactttagctcaagtcaaccaagaatggaatttagaggcagacaaaaaagat
ggtgaacttgactccaaagaggaatttaaggaaaagctggtatctttctgtagccagcca
tctgttattgctagtcctcagataaatggtgaaatagacttgctagcaagtggttctgta
gcagattctgaatgttttggaagcgtaactgaaatctctttaccattggctgagcaaata
gagtctccagaaattaagagcaagaatgaagtagtgactcctgagaagaattgctgtgaa
aattgtcttccatctaagaaatccgtgcccttaggtcgtaaaggaaaacgtgggcttcac
aggagactccccaatcccagttctaagagatgccgaagcagcattcccagcaccagtgga
cattttgttaagcaaacagcgctatcggaaaacacatcattgcctggctgttctttgcca
ccttcaagcaaagttaaagttggtggcccattaaggaggaaaaacagtgatatattagat
gactccattagcccttcaccaggtttaccaccttctacactgaatagtccaagttacagg
cgaatgatgtccagcccctcagctgtgaagctgttgcccaatagccttatggccatgaaa
agaaatcatagaggagagaccttgctccatattgcttcaattaagggcgacgtaccttct
gttgaataccttttacaaaatggaagcgacccaaacgttaaagaccatgctggatggaca
ccattgcatgaggcctgcagtcatgggcacctgaaggtagtggaattgctgctccagcac
aaggcattggtgaacaccactgggtatcagaacgactcaccactccacgatgcagccaag
aatgggcacatggatatagtcaagttgttactttcctatggagcctccaggaacgctgtt
aacatatttggtctgcgacctgtggattgtacagacagtgaaaatatgaaatcactattg
ctgctaccagagaagaatgaatcatcatcaactagccattgctcagtaatgcacactggt
cagcgtagagatggtcctcttgtacttataggcagtggactttcttcagaacaacagaaa
atgctcagtgaacttgcagcaattctcaaggctaaaaaatgcactgagtttgacagtaca
gtaactcatgtcattgttcctggtgataaagttcaaagtaccctgaaatgtatgctcggg
attctcagtggatgctggatcctaaagtttgaatgggtgaaagcatgtctacaaagaaaa
gaatatgaacaggaagaaaaatatgaaattcctgaaggaccacagagaagcaggctcaac
agagaacagctgttgccaaagctgtttgatggatgctacttctattttgggggagccttc
aaacaccatccaaaggacaaccttattaagctcgtcaccgcagctgggggccagatcctc
agtagaaagcccaagccagacagtgacgtgactcaaaccattaatacagtcgcgtaccat
gccaagccagattctgaccagcgcttctgtacacagtatatcatctatgaggacttgtct
aatcatcgcccagagagggttcggcagggcaaagtctggatggctccttctagctggttt
atagattgtgtgatgtcctttgagttgcttcctcttgacagctga
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