Pteropus alecto (black flying fox): 102893728
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Entry
102893728 CDS
T02993
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X3
KO
K08735
DNA mismatch repair protein MSH2
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale01524
Platinum drug resistance
pale03430
Mismatch repair
pale05200
Pathways in cancer
pale05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102893728 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102893728 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
102893728 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102893728 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pale03400
]
102893728 (MSH2)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102893728 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
102893728
NCBI-ProteinID:
XP_006909676
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEFGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYIGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKAFKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQKKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPAGETTGDMGKLRQVIQRGGILITERKRADFSTKDVYQD
LNRLLKGKKGEQVNSVVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRACNLFQGSVEDTSGSQSLTALLNKCKTPQGQRLVNQWIKQPLMDKSRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVISA
LGKYEGKHQTLLLAVFVTPFVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISTARDLGLDSGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSTLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPIPYVRPVILEKGQGRIKLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIIIGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGESQENDEMEPAAKRCYLEREQGEKIIQEFLCKVKQMPFTEMS
EENITIKLKQLKAEVIAKNNRFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggcagagtttggctttgtg
cgcttctttcagggaatgccggagaagccgaccactacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccgtgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtagtcaagtacattgggccggcaggagcaaagactctagagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggccttcaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaataatgat
atgtcagcttccattggtgttgtgggtgtaaaaatgtcaacagttgatggtcaaagacag
gttggagttgggtatgttgactccatacagaagaagctaggactatgtgagttccctgat
aatgatcagttctccaatctggaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccagcgggagagactactggagacatgggaaaactgaggcaggttattcagagagga
ggaattcttatcacagaaagaaaaagagctgacttttccacaaaagatgtttatcaggac
ctcaaccggttgttgaaaggcaaaaaaggagaacaggtgaatagtgttgtcttgccggaa
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaattgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcctgtaaccttttccagggttctgttgaagatacc
agtggatctcagtctctgactgcattgctgaataaatgcaaaacccctcagggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagagcagaatagaagagagactg
aatttagtggaagcttttgtagaagatgcagaattgaggcagactttacaagaagattta
ctgcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactatatcagggcataaaccaactccctagtgttataagtgct
ctgggaaaatacgaaggaaaacatcagacattgttgttggcagtttttgtgactcctttt
gttgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgatttagaaaagaagatgcaatcaacattaataagtacagca
agagatctaggcttggattctggcaaacagattaaattggattccaactcacagtttgga
tattactttcgtgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagttgatattcagaagaatggtgttaaatttaccaatagtacattaacttctctcaat
gaagagtataccaaaaataaaactgagtacgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgtcgtcagctttgcccatgtgtcaaatggagcacctattccatatgta
cgaccggtcattttggagaaagggcaaggaagaattaagttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattataggccccaatatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcccaaattgggtgttttgtgccgtgtgagtcagca
gaagtgtccattgtggactgtatcttggcccgggtaggggctggtgacagtcaattgaaa
ggagtctccacctttatggctgaaatgttagaaactgcttctattctcagatctgcgact
aaagattctttaataatcattgacgaattgggaagaggaacctctacctatgatggattc
gggttggcatgggctatatcagagtacattgcaacaaaaatcggtgctttttgcatgttt
gcaactcattttcatgaacttactgccttggcaaatcagataccaactgttaataatcta
catgtcacagcactaactacagaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgttgcagagcttgctaatttccctaggcatgta
atagagtgtgctaaacaaaaagccctggaactagaagagtttcagaatattggagagtca
caagaaaatgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gagaaaattattcaagaatttttatgcaaggtgaagcaaatgcccttcactgaaatgtca
gaagaaaacatcacaataaagttaaaacagctgaaagctgaggtgatagcaaagaataat
aggtttgtaaatgaaatcatttcacgaataaaggttactacgtga
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