Pteropus alecto (black flying fox): 102894333
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Entry
102894333 CDS
T02993
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04151
PI3K-Akt signaling pathway
pale04510
Focal adhesion
pale04512
ECM-receptor interaction
pale04518
Integrin signaling
pale04974
Protein digestion and absorption
pale05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102894333 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102894333 (COL2A1)
04518 Integrin signaling
102894333 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102894333 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102894333 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102894333 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pale00536
]
102894333 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pale00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102894333 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
102894333
NCBI-ProteinID:
XP_006916906
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGASQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPFGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGAREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKGGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttgggggcttcccagacgctggtgctgctgacgctactcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggccctcctggcccccctgggccccctggccttggtggaaactttgct
gcccagatggctggaggatttgatgaaaaggccggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccgcgaggacctccaggccctgctggtgctcccggccct
caaggatttcaaggcaaccctggtgaaccaggggaacctggcgtctccggtcccatgggt
ccccgtggtcctcctgggccccctggaaaacctggtgatgatggtgaagctggaaagcct
ggaaaatctggcgaaagaggccctcctggccctcagggtgctcggggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggc
gaagctggtgctccaggtgtgaagggcgagagtggttcccctggtgagaatggttctccg
ggcccaatgggtccccgtggtctgcctggtgagagaggacggactggccctgctggtgcc
gcaggtgcccggggcaacgatggtcagcctggccctgcaggacctccaggtcccgtgggt
cctgccggtggtcctggcttccctggggctcctggtgccaagggcgaagctggtcccacc
ggtgctcgtggtcccgaaggcgctcaaggtcctcgtggtgaacctggcactcctgggtcc
cctgggcctgctggtgcctctggtaaccctggaacagatggaattcctggagccaaagga
tctgctggcgctcctggcattgctggtgctcccggctttcctgggccccgtggtccaccc
ggtccccaaggtgcaactgggcctctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggtgaacaaggcccgaagggagaacctggccctgcaggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcccggtggtgct
gggcccttcggtccccctggagaaagaggtgctcctggcaaccgtggtttcccaggtcaa
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggc
cccaagggagccaatggtgacccaggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggccgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagacggtcgccctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcccgggaaagctggtgagaaa
ggacttcctggcgctcctggtctgagaggtcttcctggcaaagatggtgaaacaggtgcc
gcaggccccccaggacccgctggacctgctggtgaacgaggcgaacagggtgctcctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccccggcctcgtgggtcccagaggagaa
cgagggttcccaggtgaacgcggctctcctggtgcccagggcctccagggtgcccgtggc
ctccccggcacccctggcactgatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggtatc
gctgggccgaagggagacaggggtgatgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggtctgactggtcccattggaccccctggcccggccggtgccaat
ggtgagaagggagaagttggccctcctggtcctgcaggaacagctggtgctcgtggcgcc
ccgggtgaacgtggagagactggaccccctggacctgctggattcgccggtcctcccggt
gctgatggccagccaggggccaagggcgagcaaggagaagctggccagaagggtgacgct
ggcgccccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagccagaggtgctcaaggtcccccgggagccaccggattccccgga
gctgctggccgtgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcccccctggtcga
gctggtgaccctggcctccaaggtcctgcaggagcccctggcgagaagggagagcctgga
gatgatggcccctcaggtcccgatggtcctccaggtccccagggtctggctggtcagagg
ggcatcgttggtcttcctgggcagcgtggtgagagaggattccctggcctgcccggccca
tcgggtgagcccggcaagcagggagctcctggcgcatctggagaccgaggtccccctggc
cctgtgggtcctcctggcctgactggtcctgctggtgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggtcccctgggtgctcctggagcccctgggccccctggctctcctggcccagctggc
ccaactggcaagcagggagaccgaggagaagctggcgcacaaggtcccatgggacccgca
ggaccagctggagcccggggaatcccaggccctcaaggcccccgaggtgataaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcaccggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtgggtccttctggcaaagatggggctaatggaatc
cctggccccattggacctcccggtccccgtggacgttcaggcgaaacaggccctgctggt
cctcctggaaatcctggaccccctggccctccaggtccccctggtcctggcatcgacatg
tcggcctttgctggcctgggtgcgagagagaaaggccctgaccccctgcagtatatgcgg
gcagaccaggcagctggcaacctgagacagcatgacgccgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccctgaaggctcccgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagggcggagactactggatt
gaccccaaccagggctgcaccttagacgccatgaaggttttctgcaacatggagactggt
gagacctgcgtctaccccaacccagccaatgttcccaagaagaactggtggagcagcaag
agcaaggacaagaagcatatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgttcagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaacatcacctaccattgcaagaacagcatcgcctacctg
gatgaagcagctggcaacctcaagaaggccttgctcatccagggctccaacgacgtggag
atccgggctgagggcaacagcaggttcacgtatactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctg
cccatcattgacattgcacccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
