Pteropus alecto (black flying fox): 102895116
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Entry
102895116 CDS
T02993
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03015
mRNA surveillance pathway
pale03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102895116 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102895116 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102895116 (CPSF6)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102895116 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102895116
NCBI-ProteinID:
XP_024896843
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All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSFEGSALRFETLKKVRMQGFPIIISISQEAEYGGHDQIDLYDDVISPSANNGDAPEDRD
YMDTLPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILE
IKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQS
RKTTQSGQMSGEGKAGPPGGSSRAAFPQSGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFP
GNLIKHLVKGTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPP
PGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQ
GPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSD
SRGPPPTDPYGRPPPYDRGDYGPPGRMDLMKQFEEIMNRNRAISSSAISRAVSDASAGDY
GSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHS
RSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgagggatctgctttacgttttgaaacgttgaagaaagtgagaatgcaaggt
tttccgatcattatttctatatctcaggaagctgaatatggtgggcatgatcagatagat
ttgtatgatgatgtcatctctccatctgcaaataatggagatgccccagaagaccgggat
tacatggatactctcccaccaactgttggtgatgatgtgggaaaaggagcagcaccaaat
gttgtctatacatatactggaaagagaattgcattatatattggaaatctaacatggtgg
acaacagatgaagacttgactgaagcagttcattctctgggagtaaatgatattttggaa
ataaaattttttgaaaatagggcaaatggccagtcaaaggggtttgcccttgttggtgtt
ggatctgaagcatcctcaaaaaagttaatggatctgttgcctaaaagagaacttcatggt
cagaatcctgttgtaactccatgcaataaacagttcctgagtcaatttgaaatgcagtcc
aggaaaactacacaatcaggacaaatgtctggggaaggtaaagctggtcctccaggaggc
agttcacgtgcagcatttccacaaagtggtagaggacggggccgttttccaggggctgtt
cccggtggggacagatttcctgggccagcaggaccaggagggccacccccaccttttcca
ggaaatttgatcaagcatcttgttaaaggaactcggcctttgttcctggaaactaggatt
ccatggcatatggggcacagcatagaggaaatacccatttttggcctaaaagctggacag
actccaccacgtccacccttaggccctccaggcccacctggtccaccaggtcctccacct
cctggtcaggttctgcctcctcctttagctgggcctcctaatcgaggagatcgccctcca
ccgccagttctttttcctggacaaccttttgggcagcctccattgggtccgcttcctcct
ggtcctccacctccagttccaggctacggcccccctcctggcccaccacctccacaacag
ggaccacctccacctccaggcccctttccacctcgcccacctggccctcttgggccaccc
cttacacttgctcctcctccgcatcttcctggaccacctccaggtgccccaccgccagct
ccacatgtgaacccggctttctttcctccaccaactaacagcggcatgcctacatcagat
agccggggtccaccaccaacagatccatatggccgacctccgccatatgataggggtgac
tatgggcctcctggaagaatggatttgatgaagcagtttgaagaaatcatgaatagaaat
agggcaatctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattat
gggagtgctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatcc
gctgatgatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgaa
tctaagtcttatggttctggatcaagaagacgtgaacggtcaagagagagggaccatagt
agatcacgagaaaaaagtcggcgtcataaatcccgtagtagagatcgtcatgatgattat
tatagagagagaagcagagaacgagagagacaccgggaccgagaccgggaccgggaccga
gagcgtgaccgagagcgcgagtatcgtcatcgttag
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