Pteropus alecto (black flying fox): 102895248
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Entry
102895248 CDS
T02993
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04151
PI3K-Akt signaling pathway
pale04510
Focal adhesion
pale04512
ECM-receptor interaction
pale04820
Cytoskeleton in muscle cells
pale04926
Relaxin signaling pathway
pale04933
AGE-RAGE signaling pathway in diabetic complications
pale04974
Protein digestion and absorption
pale05146
Amoebiasis
pale05165
Human papillomavirus infection
pale05200
Pathways in cancer
pale05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102895248 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102895248 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102895248 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102895248 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102895248 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
102895248 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102895248 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
102895248 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102895248 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
102895248 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102895248 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pale04147
]
102895248 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
pale00536
]
102895248 (COL4A6)
Exosome [BR:
pale04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102895248 (COL4A6)
Glycosaminoglycan binding proteins [BR:
pale00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102895248 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102895248
NCBI-ProteinID:
XP_015447141
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MHPRLWLLVVTLCLTEKLAGAGEKKSYGKPCGGQDCSGGCKCFPEKGARGQPGSIGIQGP
SGPQGFVGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGIDGIPGHPGQPGSRGP
PGRDGCNGTQGAVGFPGPDGFPGLLGSPGPPGQKGSKGEPVFAQGSFKGMKGDPGLPGLD
GITGPRGIPGSPGAVGPIGSPGLQGPPGFLGLPGLDGNMGLGFQGEKGDKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLQGFPGTSGPPGFLGFGTAGEKGEKGIPGLPGPRG
LMGLDGVQGPPGSQGKKGSSGFPGLNGLPGIKGEKGDIGLPGPDVFIDRDGAVISGYPGD
PGMPGLPGPKGDEGIQGPSGSSGIPGLPASPGAPGALGPQGYPGLKGDKGNPGRTTIGEA
GFPGKDGLPGLPGLPGPPGLAFETGTLKNTEPGFLGLRGERGPKGNQGLKGVKGDSGFCA
CDGGVPNNGPPGDPGLPGPPGHIGLPGLKGTRGDPGFGGPPGPPGALGLFGPQGPTGPKG
KKGEPTFSTRLGMPGKQGDPGPQGLPGDTGAPGKDGIPGLPGLPGLPGDDGQGFPGEKGL
PGIPGEKGHSGLPGLPGIGLPGSPGPRGLPGDQGIHGLPGNQGLPGPPGITLPCIIPGSY
GPTGFPGAPGFPGPKGAHGLPGTPGQPGSHGSKGEPGSVGLVHLPELPGFPGPRGEMGLP
GFPGLPGKDGLPGNVGSPGLLGSKGEPGDIFGAESGVPGERGLQGLPGDRGLPGDSGFPG
PKGLPGKLGLLGPKGERGSPGTPGHAGQPGAPGPGGLLGIKGKPGLPGKPGFPGTSGHPG
KKGPEGKTGPPASTGMKGLPGLKGLPGSLGLIGFLGNSGLPGATGLPGLPGMKGEKGSVG
LTGFLGMPGLPGIPGVSGLKGIPGLTGKVGPSGQAGSPGEKGDRGDPGPVRIPSLRPPML
NLQFKGNKGSRGSAGSDGFPGLRGDKGEAGRPGLPGLPGAPGLPSTIKGLIGRPGPPGST
GLRGLPGLKGNPGISGFPGMSGKSGSQGLSGAPGLPGASGLPGSKGDQGQTLGLSGSPGP
KGQLGDPGLEGIKGKAGLVGDIGFPGIKGDDGKVGISGDVGIPGSPGFPGIAGMRGNPGL
PGSPGHPGTPGPLGLPGLIGTKGYPGVLGLHGLNGLPGTKGTHGTPGPSIIGVPGPAGLP
GPKGEKGSLGISTGAPGKPGIKGPKGGRGFPGLQGPAGPPGAPALSLPSVIAGQPGDPGR
PGLDGERGRPGPPGPLGPPGPSSDQGDSGDPGFPGIPGPKGPKGGQGIPGLSGLPGELGL
KGLRGEPGFMGTPGKVGAPGDPGFPGMKGKTGPRGFTGPQGAPGQTPIAEAIQAPLGSMG
LXXXXXXPGFRGDPGVQGPVGLQGSKGVPGIPGKDGPNGLPGPPGALGDPGLPGLQGPPG
FEGPGKQGPFGRAGLPGQSVRVGYTLVKHSQSQQVPLCPAGMTQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPIGQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGTEGGGQSLVSPGSC
LEDFRTTPFIECNGARGTCHYFANKYSFWLTTVEERQQFGEEPVPETLKAGQLHTRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctaggttgtggctgctcgttgttacgttgtgcctgaccgagaaacttgcagga
gcgggagagaagaaatcctatggaaagccatgtggaggccaagactgcagtgggggctgt
aaatgctttcctgagaaaggagcgagaggccaaccaggatcaattggaattcaaggtcca
tcaggtcctcaaggatttgttggccctagtggtttatcaggattgaaaggagaaaggggc
tccccaggccctctgggaccatatggaccaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcgatgggattccgggccaccctggacagccagggtccagaggccca
cctggccgggatggctgtaatgggactcaaggagctgttggatttccaggccctgatggt
tttcctgggcttctcggatcacctgggcctcctggtcagaaaggatctaaaggtgaacct
gtctttgcccaaggtagtttcaaaggaatgaagggggatcctgggctgcctggattagat
ggaatcactggcccacgaggaatacccggctccccaggagctgtaggacccataggatca
ccaggattacaaggtcctccaggctttcttggtcttcctggtcttgatggaaatatgggg
ttaggtttccaaggagagaaaggagacaagggggatgttggcctccctggccctgcagga
cctccaccatctactggagaattggaatttatgggatttcccaaaggaaagaaaggatct
aagggggaaccagggcttcagggtttcccaggaacaagtggccctccaggtttcctggga
tttggaactgctggagaaaagggagaaaaaggaatccctggtttaccaggacctaggggt
ctcatgggtttagatggagtccaaggccctccagggagtcagggcaagaaggggtcctca
ggtttccccgggcttaatggactgccaggaattaagggtgaaaaaggtgacattggtttg
ccaggtccagatgttttcatcgatagagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggacctaaaggtgatgaaggtatccagggcccttctggc
tcttctggcatccctggcttaccagcttcaccgggtgcgccaggtgccctagggccccaa
gggtatccaggcttgaaaggagacaaaggaaacccaggccgcaccacaattggggaagct
ggctttcctggcaaagatggtttgccaggtttaccaggcctgccaggcccacctggtctg
gcatttgagactggaaccctaaagaacacagagccagggttccttggtctccgaggagaa
cgaggtccaaaaggaaaccaaggtctcaaaggagttaaaggggattcaggtttttgtgct
tgtgatggtggtgtccctaacaatggaccacctggggatccaggcctgcctgggccacca
ggtcacataggcctgccaggccttaaaggaaccagaggagatccaggctttgggggccca
ccgggcccaccaggggctctaggtttatttgggcctcaaggtcctacaggtcccaaagga
aagaaaggggaaccaactttcagtacaagattagggatgccagggaaacagggtgatcct
ggcccccagggtctccctggtgatacaggagcaccaggcaaggatggaataccaggttta
ccaggtctgccaggtcttccgggtgatgatggacagggcttcccaggtgaaaagggatta
cctggaatccctggtgaaaaaggccatagtggtctacctggcctcccaggaattgggcta
ccaggatctcctggacctcgtgggcttcctggagaccaaggaatacatggattgccaggg
aatcaaggcctccctgggcctccaggtatcaccttgccttgtattattcctgggtcgtat
ggtccaacaggattcccaggagctcctggattcccaggccctaaaggggcccatggcctc
cctgggactccaggccagcctggatcacatggaagtaaaggagagcctggaagtgtagga
ttggttcaccttcctgaattgccaggatttcctggacctcgtggggagatgggcttgcct
gggtttcctggactccctggaaaagatggcttgcctggcaacgttgggagtccaggttta
ctaggttccaagggagaacctggtgacatctttggtgctgaaagtggtgttccaggagag
cgaggcctacagggattgccaggggacagaggattgcctggagactctggctttccagga
cctaaaggtttgcctgggaagttgggcttgctaggccccaaaggtgagcggggcagccct
ggaacaccaggccatgcaggacagccaggcgccccagggcctggtggtttactcggtatc
aagggcaaacccgggctaccaggaaaaccaggctttccaggcacttcaggacatcctgga
aagaaaggcccagaaggcaagacaggtcctcctgcatcaactggaatgaaaggtctgcct
gggctgaaaggccttcctggatctttagggttaattggcttcctgggaaactcaggcttg
ccaggggccactggattgccgggcctgccgggtatgaagggtgaaaaggggtctgttgga
ctgacaggttttctagggatgccgggtctccctggtattcctggtgtaagcggattaaag
ggaattcctgggttgactggaaaagtaggaccatctggacaggctggtagccctggtgaa
aaaggagacagaggtgacccggggccagtcagaattcccagtctaagacctccaatgctg
aaccttcagttcaaaggaaacaaaggctctcggggctcagctggatccgatggatttcct
ggactcagaggtgataaaggagaagctggccgccctggattaccaggcttgcctggagct
cctggattgcccagcacaatcaaggggcttattgggagaccaggcccccctggctctaca
ggactacggggcttacctggtctgaaggggaaccctggaatctcaggcttcccaggaatg
tcaggaaaaagcggttcgcagggtctcagcggagctcctgggctccctggagcatctggc
ctcccaggttcaaaaggagatcaaggccagacacttggactttctggtagcccaggaccc
aagggacaacttggggatcctggcttggaaggtattaaagggaaagctggacttgttggt
gacataggtttccccggaattaaaggtgatgatgggaaagttggtatttctggagatgtt
ggaattcctggctccccaggatttcctgggattgcaggcatgagaggaaacccagggctt
cctggttctccgggccacccagggacacctgggcccctgggacttcctggtctaatagga
accaaaggttatcctggagttcttggtttgcatggattaaatgggcttccaggaaccaag
ggcacccatggaactccaggacctagtataatcggtgtgccagggccagctggcctgcct
ggtcccaaaggcgaaaaaggttctctgggaattagcactggagccccagggaagccaggc
ataaaagggccaaaaggtggccgaggtttcccaggtctccagggccctgctggtcccccc
ggtgccccagccctctctttgccctcagtcatagcaggacagcctggtgaccctgggcga
ccaggcctagatggagaacgaggccgcccaggtcccccaggtcccctaggtccccctgga
ccatcctcggatcaaggcgactctggagaccctggctttcctggaattcctggccctaaa
gggcctaagggaggccaaggaattccaggtctctctggcctccctggagagctaggactg
aaaggcctgagaggtgagcctggcttcatggggactccaggcaaggttggggcacctgga
gacccaggatttcccggaatgaaggggaagacagggccaagaggctttactggcccccag
ggtgcacctggccaaacaccaattgcagaagccatccaggctcctcttggatcgatgggt
ctnnnnnnnnnnnnnnnnnttcctggtttcaggggggaccctggagttcaaggccctgta
ggcctacaaggctccaaaggtgttcctggcatccctggcaaagatggccccaatgggctc
cccggcccgccgggggctcttggtgatcctggtctccctggactgcaaggccctccagga
tttgaaggtccagggaaacagggtcccttcgggagggctggattgcctggacagagcgtg
agagtgggctacaccttggtgaagcacagccagtcacaacaggtgcctctgtgccctgcg
gggatgacccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaagcc
cacaatcaggacttggggtttgctggctcctgcttgccccgtttcagcaccatgcccttc
atctactgcaacatcaacgaagtgtgccactatgccaggcgcaatgataaatcctactgg
ctctccaccaccgcccccatccccatgatgcctattggccagacacagatcccccagtac
atcagccgctgctcagtgtgtgaagctccctcacaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccctgggctggcgcagcctctggatcgggtactccttcctc
atgcacacggccgctggcaccgagggtggaggccagtccttggtttcgcctggctcctgc
ctagaggattttcgcaccactccttttattgagtgcaatggtgcccggggcacctgccac
tattttgccaacaagtacagtttctggttgacgacagtggaggagagacagcagtttggg
gaggaacctgtgcctgaaacactgaaagctgggcagcttcacacccgggtcagccgctgc
caggtgtgtatgaaaagcctgtag
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integrated database retrieval system
