Pteropus alecto (black flying fox): 102895967
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Entry
102895967 CDS
T02993
Symbol
HELZ2
Name
(RefSeq) helicase with zinc finger domain 2
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102895967 (HELZ2)
Enzymes [BR:
pale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
102895967 (HELZ2)
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102895967 (HELZ2)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102895967 (HELZ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_30
AAA_19
ResIII
AAA_22
DEAD
nSTAND3
UvrD-helicase
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
zf-C2H2_jaz
AAA_24
Helicase_RecD
zf-met
Motif
Other DBs
NCBI-GeneID:
102895967
NCBI-ProteinID:
XP_024895643
LinkDB
All DBs
Position
Unknown
AA seq
2885 aa
AA seq
DB search
MPTRRVRPAPDRMVSPRPGPPPTSPTAAKEPSLARLCTQVDLCLGCTRCTQRLNESTYLL
RSVEHSCPQEVLLARLKRAAKGRLWRKVDRRPSFPRPARYEVCRYYSPGLGCRRHRNQCT
FARSPEEALVWTFEREHSLPRLWLKAAVQGGGARGEPHSPAAAIREEFGGCFQLLCSHCF
RHCPPRLCPVDPQGRCPKHGACPSLLAHMSSEGRRKQQVVEVRPQPRNGQPLAYCMFVGR
GRPCRHGASRCQYAHSAVEMAVWEAEQLGGLKRGDLLTPPAPRGDGPTACHSQPPAVQLY
CRACLVTCRSQEAFENHCSSLEHAQMVALDHAVSWERRSPPTGLSTFELCPRPDLCEYGA
LCTKAHSEQELQEWTRRVETAELREQAAWREGLVPYNVRLLAEYQRSSSEVLVLAETVDG
VSVTCNQSLEYQAEEKKTQHSWTFVIHSEEPLQHVALLKQEPGADFSLVAPHLPPGQLYA
QGERFREPGCPATSRVGVRVQSSSFGTFEQWVVFDFGRRPVLLRKLGLQVGLAHRPALGH
LEALERWHTGNRRVVPDVERTAEQEALMAKYKVPALALGFRRGGPDPGPLSCANYRQRMH
QFLYEEEAAQQQLVARLNLRGPVSLKTALQTPALGILFPPPGALYAEVPVPYSLTPDTDQ
GFLLGRAVSTALVAPVPAPDHTVFEARLETRARSEQALWLLLPGHCCTALQLQPDTSPVL
EVQFQIDPLTFRLWHEAVDALPEERLVVPDLSACTVPRPRPSRPALHGNRKQKLAVEFIA
GSSPGGPQPVAPLLIYGPFGTGKTYTLAMASLEVIRQPHTRVLICTHTNSAADIYIQEHF
HSYVSSGHPEAAPLRVMYADRPPSQTDAATLQYCCLSEDRRAFRPPTRAELEGHRIVVAT
TSQARELKVPAGFFSHILIDEAAQMLECEALTPLRYAQPGTRVVLAGDHMQVTPRLFSVA
QAAEHTLLHRLFRHYQQQEDEVARHSRVIFHENYRSTEAIISFVSRHFYVAKGNPIHASG
KVPRHPQRYPLMFCHVAGSPERDMSMTSWLNTAEVMQVVEQVQEIYDTWPRCWGSQEQRH
ICVVSHGAQVGVLRQELRKRNLGQVSVGSFEILPGREFRVVLLSTVHSHESLRSPGPPAV
QFFTDARVLNTVMTRAQSQVVAVGDAVALCSFGACSKLWKSFIRECVDRHSVCPKSLSLE
QIEQGVFQRQRWARCQQPTALAVEGSSAAVAGDTVPEEGAAEAPATEHPDAAKLEPGAVA
WTKGSAVLPRTLAAEDTGTQMAEAEERPAVGDLPSAGDAARQDVTLGHSVATEGEDADDL
EDSESDFWPSDGELNADDAILQELLDESQNVMVTVREDGLLDTVARPTSPHQARHYVDLP
RAALRQLLRAEPGLYHRCAFVQETFERATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXDRGPGGRPQGRVLGVLKRRRRELAFVCRMDEWDSRILTPIDGSVTKIFVAELKDP
QQVPIHRLLQGRVQRVRYERLPPQAWRRRLFWVRVVLWRERFYYPLGIVLEVLPEATTWE
QGLRVLDLEYGLERPSPDPASVSKVLQRYRAELGRAPGGREDCRGFPTFTVDPQGACNLD
DALSVRDLGPSYEVAVHITDVASFMPRDGALDVDARNRGTAFYAPDREPTPLLPAELCQG
AFSLLPGQDRFAVSLFVAFEKGSDRLKSLRFALSVIRSDRQLTYEEAERVIREQPGAGLE
PPARLDSVEACLAAACHYAHVLRRRRLQAACHYEQPDEDSVLGFRGAHAMVKEYMIQFNS
LVAEFLVGSECTRTITPLRWQPAPSGRQLEALREKHRDLVPLSLHLRHHLPGCSPCDTRQ
PPLHLLASLWRHVQLAAQAQDVNWLVDLVTTDDMHPSLAPASLDFRKALGRSVFGRSSQG
EEQLASHYSLQVDRYTWATSPIRRYLDVVLQRLILLALGHGGHAYPARDIDGMCQDFSRQ
HTRAQSYQRRACSLHLATRLRAQPRDKLGFVADVEAGARCFKLLFPANRDTLPDPCPVHY
RSLQLAEHPHALKGRPGLQLVWRRRIYSVQMEELCRPLPGALQDPHTRPVDAALWQQLLQ
LVEEQRWPEAAALVQEQGTAGAPQRELGQVLRSRCGHFVEVARELGSGDVLQVQLSTTLQ
RGILAPAVQLWAVAPGLSLCLEHVERPGDCFSGHAPQAWQDRCRSMDDYARVWQPFCSLE
SATGVVAENDAVTLQHVRIAWGTERAAQGRLRGAFRLEAAFLSKHCIDISFGHCYLCIRL
EGLPARPDAGELCSSSLGPGLSIDPVTYTWVAHGLTEDEDPNSKEGQADRHVRFFIQHMA
TDKVPKEVLRPGAQFTVEVLPKLLPDIRKEEAVRGLKAASQLVINIPGGRHKLNPSQTKA
VREALRKQFAVIQGPPGTGKTVAGFHIVFWLHKLNEEQWQACGAPLGGPCVLYCGPSNKS
VDVVAGLLLSRRAELKPLRVYSEQAEATEFPVPGVGSRGLPKKTPREGRPNPELRGITLH
HRIRQASNPHAPDLKAFDARLQKGEVFSKEDLNQYRKVLGKARKFELDRHGVILCTCSCA
ASASLKNLNVRQILVDEAGMATEPETLIPLVAFSQVEKVVLLGDHKQLRPVVKNEQLQSL
GLDRSLFERYSKEAYMLDTQYRMHEGICAFPSMEFYENNLKTWQGLRRLPSVLGHAEKES
CSVIFGYVQGHEQSLLVSTEEGNENSKANLEEVAEVVRIAKQLTLGKTVEPKDIAVLTPY
NAQAAQIKSGLAREGVTGVTVRSITKSQGSEWRYVLVSTVRSCPESDLDQRPTKNWLKRF
LGFVVDPNQVNVAITRAQEGLCLVGDHLLLRCCPLWRRLLDFCEDQKSLVPASQVRVRRR
PAVSS
NT seq
8658 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccgcagagtcaggccagcaccggacaggatggtgtccccaaggcctggccca
ccgcccacgagccccacggccgccaaggagccatctctggccaggctgtgcacccaggtg
gacctgtgtctgggctgcacccgctgcacccagcgcctcaacgagagcacctacctgctg
cgcagcgtggaacacagctgcccccaggaggtgctgctggcccgcctcaagcgtgctgcc
aagggcaggctctggcgcaaggtggaccgccggcccagcttcccgcggcctgcgcgctac
gaggtctgccgctactacagcccggggctgggctgccggcggcaccgcaaccagtgcacc
ttcgcccgcagccccgaggaggcgctggtctggaccttcgagcgcgagcacagcctccct
cgcctgtggctgaaggcggcggtgcaggggggcggggcccggggcgagccgcacagcccc
gcggccgccatccgtgaggagttcggcggctgcttccagctgctctgctcccactgcttc
cggcactgccccccacgcctctgccctgtggacccgcagggacgctgccccaagcatggg
gcctgcccctcgctcctggcccacatgagctctgagggccgccgcaagcagcaggtggtg
gaggtgcggccgcagccccggaacggccagccgctggcctactgcatgttcgtggggcgc
gggcggccgtgtcggcatggggcctcccgctgccagtatgcccacagcgccgtggagatg
gccgtgtgggaggcggagcagctgggtgggctcaaacgaggggacctgctcacgccccct
gcccccaggggggacgggcccacagcctgccacagccagccccctgcagtccagctgtac
tgccgcgcctgcctggtcacctgccgctcccaggaggccttcgagaaccattgctcatcc
ctggagcatgcacagatggtggccttggaccacgctgtgtcctgggagcgccgaagcccg
cccactggcctctccacctttgagctctgccctaggcctgacctgtgcgagtacggggct
ctctgcacgaaagcgcattcagagcaggagctgcaggagtggacgcggcgggtggagaca
gcggagctgcgggagcaggcggcctggcgtgaggggctggtgccctacaacgtgcggctg
ctggcggagtaccagcgcagcagcagcgaggtcctggtgctggcggagactgtcgatggt
gtgtctgttacctgcaaccagtccctggagtaccaggccgaggagaagaaaactcagcac
agctggacattcgtcatccactctgaggagcccctgcagcacgtggccctgctcaaacag
gagccgggtgcagacttctccctggtggccccccacctcccgccgggccagctgtacgca
cagggggagcgcttccgggagcccggctgcccggccacgtcccgggtgggtgtgcgcgtg
cagagctcctccttcggcaccttcgagcagtgggtggtcttcgactttggccgccggccg
gtgctgctgcggaagctggggctgcaggtgggcctggcccaccgcccggcgctcggccac
ctcgaggcgctggagcgctggcacaccggcaaccgccgtgtggtgcctgacgtggagcgc
acggcggagcaggaggccctgatggccaagtacaaggtgccggcgctggccctggggttc
cgccgcggcggcccggaccccggtcccctctcctgcgccaactaccggcagaggatgcac
cagtttctctacgaggaggaggctgcacagcagcagctggtggccaggctgaacctgcgg
ggccctgtgtccctgaagacagcactgcagacgccagccctgggcatactgtttcccccg
ccaggggccctgtatgccgaggtccccgtcccctactccttgacaccagacacggaccag
ggctttctgctgggccgagcggtcagcacggccctcgtggcgcccgtgcccgcgcctgac
cacacggtgttcgaggcgcgtctggagacccgggcccgctcggagcaggcgctgtggctg
ctgctccccggccactgctgcacggccctgcagctgcagccggacaccagccccgtgttg
gaggtgcagttccagatcgacccgctgaccttccgcctctggcacgaggccgtggacgcc
ctgcccgaggagcggctggtggtgcccgacctgtccgcttgcaccgtgccccgccctcgg
cccagccggccagcactgcacggcaaccgcaagcagaagctggccgtggagttcattgcg
ggcagcagccccgggggcccgcagcctgtcgccccgctgctcatctacggccccttcggt
acgggcaagacctacactctggccatggcctccctggaggtcatccggcagcctcacacc
agggtgctcatctgcacacacaccaacagcgcagccgacatctacatccaggagcacttc
cacagctacgtgagcagcggccaccccgaggccgccccgctccgggtgatgtacgcggac
cgcccgcccagccagaccgatgcggccacgctgcagtactgctgcctgagcgaggaccgc
cgggccttccggccgcccacacgcgccgagctggaggggcaccgcatcgtggtggccacc
acctcgcaggcccgcgagctcaaggtgcccgccggcttcttctcacacatactcatcgac
gaggccgcccagatgctggagtgcgaggcgctgacgccgctgcgctacgcccagcccggc
acccgcgtggtcctggcgggcgaccacatgcaggtgacgcccaggctcttcagcgtggcc
caggcggccgagcacacgctgctgcaccgcctcttccgacactaccagcagcaggaggac
gaggtggcccggcacagccgtgtcatcttccacgagaactaccgctccaccgaggccatc
atctccttcgtctcccgtcacttctacgtggccaagggcaaccccatccacgccagcggc
aaggtcccgcgccacccccagcgctacccgctcatgttctgccacgtggcgggcagcccc
gagcgtgacatgtcgatgacgtcgtggctcaacacggccgaggtcatgcaggtcgtcgag
caggtgcaggagatctatgacacctggcctcgctgctggggcagccaggagcagaggcac
atctgcgtcgtgtcccacggggcccaggtgggcgtgctgaggcaggagctgaggaagagg
aacctgggccaggtgtctgtgggcagctttgagatcctgccagggcgggagttccgggtg
gtgctgctgagcacggtacacagccacgagagcctgcggagcccgggcccacccgccgta
cagttcttcacagacgcccgcgtgctcaacaccgtcatgacccgcgcccagtcccaggtg
gtggccgtgggcgacgccgtggccctctgctccttcggggcctgcagcaagctctggaag
agcttcatccgggagtgtgtggatcggcacagcgtctgccccaagagcctctccctggag
cagatagagcagggcgtgttccagaggcagcgctgggcccgatgccagcagcccacggcc
ctggcagtggaggggtcttcggcagcagtggctggggacactgtcccagaagagggggca
gcggaagccccagccacagagcacccggacgcggcgaagctggagccgggcgccgtggcc
tggaccaaggggagcgcagtcctgcccaggaccttggcggctgaggacaccggcacacag
atggcagaggccgaggagcgcccagccgtcggggacctgccatcggcgggggacgcggcg
aggcaggacgtgaccctcgggcactcggtggccacggagggcgaggacgctgatgacctc
gaggactccgagtctgacttctggccgtcggacggggagctgaacgccgacgacgccatc
ctgcaagagctcctggacgagagccagaacgtgatggtgaccgtgcgggaggacgggctg
ctggacactgtcgccaggcccacgtccccgcaccaggcccggcactacgtggacctgccg
cgggctgcgctgcggcagctgctgcgtgcagagcccgggctgtaccaccgctgcgccttc
gtgcaggagaccttcgagcgggcgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnngtgaccgcggccccggggggcggccgcagggccgcgtgctgggcgtg
ctgaagcggcggcgccgtgagctggcgttcgtgtgccgcatggacgagtgggactcgcgc
atcctgacgcccatcgacggctccgtgaccaagatcttcgtggccgagctgaaggacccc
cagcaggtgcccatccaccggctcctgcagggccgcgtgcagcgcgtgcgctacgagcgg
ctcccgcctcaggcctggcgccgccggctcttctgggtgcgtgtcgtcctgtggcgggag
cgcttctactacccgctgggcatcgttctggaggtgctgcccgaggccaccacctgggag
cagggcctccgcgtcctggacctggagtacggcctggagaggccctcgccggaccccgcc
tcggtctccaaggtgctgcagaggtaccgcgccgagctgggccgggcccccggcggccgg
gaggactgccgcggcttcccgaccttcaccgtggacccgcagggcgcctgcaacctcgac
gacgccctcagcgtccgggacctgggccccagctatgaagtggccgtgcacatcaccgac
gtggccagcttcatgcccagggacggggccctggacgtggacgcccgcaatcggggcacg
gcgttctatgcccccgaccgggagccgacgcccttgctgccggccgagctctgccagggc
gcgttcagcctgctgcccggccaggaccgcttcgccgtctctctctttgtcgccttcgag
aagggcagcgaccggctcaagagcttgcgcttcgcactgtctgtgattcgctctgaccgc
cagctgacctacgaggaggcggaacgggtgatcagggagcagccgggggccggcctggag
ccgccggcccgcctggactcggtggaggcctgcctggccgccgcctgccactacgcccac
gtgctgcgccggcgccgcctgcaggccgcctgccactacgaacagccggatgaggacagc
gtgctgggcttccgcggggcccacgccatggtgaaggagtacatgatccagttcaacagc
ctggtggcagagttcctggtgggcagcgagtgcacccgaaccatcacgccgctgcggtgg
cagccggcgcccagcggccgccagctggaggccctgcgcgagaagcacagggacctggtg
cccctgtccctgcacctgcgccaccacctgcctggctgcagcccctgtgacacgcggcag
cccccgctccacctgctggcctccctctggaggcacgtccagctggcagcccaggcccag
gatgtcaactggctggtggacctcgtcaccacggacgacatgcatccctctctggctccc
gccagcctggacttccgcaaggccctgggccgctctgtcttcggccgctccagccagggt
gaggaacagctggccagccactactcgctgcaggtggacaggtacacctgggccacttcg
cccatccgcaggtacctggacgtggtgctgcagcggctgatcctgctggcgctgggccac
gggggccacgcctaccccgccagggacatcgatgggatgtgccaagacttcagccgccag
cacacgcgcgcccagagctaccagcgccgggcctgcagcctgcacctcgctacgcggctc
agggcccagccacgtgataagctgggcttcgtggcggacgtggaggcgggcgcccgctgc
ttcaagctgctcttcccggccaaccgcgacaccctgcccgacccctgccccgtccactac
cgctccctgcagctggccgagcacccccacgccctgaagggccggccgggcctgcagctc
gtgtggcgacgccgtatctactcggtgcagatggaggagctgtgccgcccgctgcccggc
gccctgcaggacccgcacacccggcccgtggacgccgccttgtggcagcagctgctgcag
ctggtggaggagcagcggtggccggaggcggctgccctcgtgcaggagcagggcacggca
ggggccccacagcgggagctggggcaggtgctgcgcagtcgctgcggccacttcgtggag
gtggcccgggagctgggcagcggggacgtgctgcaggtgcagctcagcaccaccctgcag
cggggcatcctggcaccggccgtgcagctgtgggccgtggcgcccggcctcagcctctgc
ctggagcacgtggagcggccgggcgactgcttctcgggccacgcgccccaggcgtggcag
gaccggtgccgcagcatggacgactacgcccgcgtgtggcagccgttctgctccctggag
tcggccaccggcgtggtggccgagaatgacgccgtcacgctgcagcacgtgcgcatcgcc
tggggcacggagcgggcggcgcaggggcggctgcggggcgccttccgcctggaggccgcc
ttcctcagcaagcactgcatcgacatcagcttcggccactgctacctctgcatccggctc
gaggggctgccggccaggcccgacgcaggggagctgtgctccagcagcctgggccccggc
ctgagcatcgaccctgtcacgtacacctgggtggcccacgggctgacggaggacgaggac
ccaaattcaaaggagggccaggccgaccggcacgtgcgcttcttcatccagcacatggcc
acagacaaggttccgaaggaggttctgaggcctggcgcccaattcaccgtcgaggtgctg
cccaagctgctgcccgacatccgcaaggaagaagcggtgcgtgggctgaaggctgcgtcc
cagctggtcatcaatatccccggaggccgccataagctgaaccccagccagaccaaggcc
gtcagggaggctctgaggaagcagttcgccgtcatccagggcccgccaggcacggggaag
acagtagcaggcttccacattgtgttctggcttcacaaactcaacgaggagcagtggcag
gcctgcggcgccccgcttggcggcccctgcgtcttgtactgcggcccctccaacaagtca
gtggacgtcgtggcaggactgctcctgagcaggagagcagagctgaagccccttcgcgtg
tacagtgaacaggccgaggccactgagttcccagtgccgggcgtgggcagcaggggcctg
cccaagaagaccccgcgagaggggcgacccaacccggagctcaggggcatcacgctgcac
caccggatccggcaggcttccaacccccacgcgcccgacctcaaggccttcgacgcccgg
ctgcagaaaggggaggtcttctccaaggaggatctcaaccagtacaggaaggtcctgggg
aaggcacggaagttcgagctggaccggcatggggtcatcctgtgcacgtgctcgtgtgcg
gcctcagccagcctcaagaacctgaacgtccggcagatcctcgtggacgaggcaggcatg
gccacggagcccgagaccctcatccccctggtggccttctctcaggtggagaaggtggtt
cttcttggggaccacaagcagctgcggcctgtggtcaagaacgagcagctgcagagcctg
gggctggatcggtccttgttcgagaggtactccaaggaggcctacatgctggacacgcag
taccgcatgcacgagggcatctgtgccttcccttccatggagttctacgagaataacctg
aagacttggcagggcttgaggcggctgcccagtgtcctgggccacgccgagaaagagagc
tgctctgtcatctttggctacgtgcagggccacgagcagagcctgctggtgtccacagag
gaggggaacgagaactccaaggccaacctggaggaggtggcagaggtggtccgcatcgcc
aagcagctgaccctgggcaagacagtggagcccaaggacattgctgtgctcacgccctac
aacgcgcaggctgcacagatcaagagtggcctggcacgggagggtgtcaccggcgtgacc
gtgcgctccatcaccaagagccaggggagtgagtggcgctacgtgctggtgagcactgtc
cgctcgtgccctgagagcgacctggaccagcggccgaccaagaactggctgaagaggttt
ctgggtttcgtcgtggaccccaaccaagtgaacgtggccatcaccagggcccaggagggg
ctctgcctcgtcggcgaccacctcctcctgcgctgctgtcctctctggcgtcgactcctg
gacttctgtgaggaccagaagagcctcgtgcctgccagccaggtgcgggtccggaggagg
ccggctgtgtcttcctga
DBGET
integrated database retrieval system
