Pteropus alecto (black flying fox): 102896324
Help
Entry
102896324 CDS
T02993
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102896324 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pale03021
]
102896324 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pale03019
]
102896324 (SUPT5H)
Transcription machinery [BR:
pale03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102896324 (SUPT5H)
RNA polymerase I system
102896324 (SUPT5H)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
102896324 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
102896324
NCBI-ProteinID:
XP_006905457
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTENTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDPDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctctgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtggaggaggagcggcggagtgcagcaggcagtgagaaggaggaa
gagcccgaggaagaagaggaggaggaagaggaagaagaatatgatgaggaagaggaagag
gaagatgatgaccggccccccaagaaaccccgccatggtggcttcattttggatgaggct
gatgtggacgatgagtatgaagatgaggaccagtgggaggatggagcagaagacattcta
gagaaagaagagatcgaagcctccaatatcgataatgttgtcctggatgaagaccgttct
ggggctcgccgcctacagaacctctggagggaccagcgagaagaagaactgggcgaatat
tacatgaagaaatacgccaagtcatctgtgggagagacggtgtatggagggtccgatgag
ctctccgacgacatcacccagcagcagctgctcccgggagtcaaggatcccaatctgtgg
actgtcaaatgtaagattggggaggaacgtgccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcggtagtggcaccagagcat
gtgaagggttacatctacgtggaggcctacaagcagacccatgtgaagcaggccatcgag
ggcgtgggcaacctgcggcttggctactggaaccaacagatggtacccatcaaggagatg
acggatgtgctcaaagtggtgaaggaagtggctaacctgaaacccaaatcctgggtccgc
ctcaagcggggcatctataaggacgacatcgcacaggtggattatgtggagcccagccaa
aacaccatctctttgaagatgatcccacgcattgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gacgccgagaagatcaggtccctggggggcgatgtcgcctctgatggcgacttcctcatc
tttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgattacagagggtgtgaagcccacactctcagagctggagaagtttgaagaccagcca
gagggcattgacctggaagtggtgactgagaacacaggaaaggagcgggagcacaacttc
caacctggggacaatgtggaggtgtgtgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaagtacttcaagatgggggaccacgtgaaggtg
attgccggccgattcgagggtgacacgggcctcattgtgcgagtagaggagaacttcgtc
attctcttctctgacctcaccatgcacgagctgaaggtgctcccccgggacctgcagctc
tgctcggagacggcgtcaggtgtggatgttgggggccagcatgaatggggggaactagtg
cagctggacccccagaccgtgggtgtcattgtgcgtctggagcgggagaccttccaggtg
ctgaacatgtatgggaaagtggtgactgtcaggcaccaggctgtgactcggaagaaggac
aaccgctttgccgtggccctggactcagaacagaacaacatccatgtgaaagacattgtc
aaggtcattgacggccctcactcaggccgggagggcgagattcgccatctgttccgcagc
ttcgccttcctgcattgcaagaaactggtggagaatgggggcatgtttgtctgcaagacc
cgccacctggtgctggctgggggctcaaagccccgagatgtgaccaatttcaccgtgggt
ggctttgctcctatgagcccccggatcagcagccccatgcaccccagcgctggaggtcag
cgtggtggctttggcagcccaggtggcagtagcggcggcatgagcaggggccgggggcgg
agagacaatgagctcatcggccagactgtgcgcatctcccaggggccctacaaaggctac
attggtgtggtgaaggatgccacggagtccacggcccgcgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcgactcaccacggtgggctcacggcgccctggtggc
atgacgtcaacctatgggcggacaccgatgtatggctcccagacgcccatgtatggctct
ggctcccgcacgcccatgtatggctctcagacacctctccaggatggtagccgcaccccg
cattatggctcacagacacctctgcatgatggcagccgcactcctgcccagagcggggcc
tgggaccccaacaaccctaacacgccgtcacgggctgaggaagaatacgagtatgccttc
gacgacgagcccaccccatccccacaggcctacgggggtacccccaatccacaaacacct
ggttatccagacccctcgtccccacaggtcaacccacagtacaacccacaaacgccaggg
acaccagccatgtacaacacagaccagttctccccctatgcagccccctctccccagggc
tcctaccagcccagccccagtccccagagctaccaccaggtggcgccaagcccagccggc
taccagaatactcactctcctgccagctaccaccctacaccctcgcccatggcctatcag
gccagtcccagcccgagccctgttggctatagtccaatgacacccggagccccctctcct
ggcggctacaacccacacacaccaggctcaggcattgagcagaactctagtgattgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtggggcag
acaggtgtcatccgcagtgtcacgggaggcatgtgctctgtgtacctgaaggacagtgag
aaggtcgtcagtatctccagtgagcacctagaacccataaccccaaccaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacaggtgtcctgctgagcattgatggt
gaggatggcatcgtccgcatggaccctgatgaacagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
