Pteropus alecto (black flying fox): 102897553
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Entry
102897553 CDS
T02993
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102897553 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pale03041
]
102897553 (PRPF40A)
Spliceosome [BR:
pale03041
]
Complex A
U1 snRNP components
U1 related factors
102897553 (PRPF40A)
Complex B
102897553 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
102897553
NCBI-ProteinID:
XP_015452028
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRPGTGAERGGLMVSEMESHPPARGAGDGERRLSGSSLCSSSWVSADGFLRRRPSMGHPG
MHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQAS
MQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ
LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMI
KAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASSST
SASNTVGGTVPAVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAVQDQSVEVSSNAG
EETSKQETLADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMK
MIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTST
TRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDN
MANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSL
LRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDL
FKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAVISSTKRSTTLDAGNIKLA
FNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAF
EDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSH
SKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKD
RESEKERTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggggacgggagccgaacgtggaggcctcatggtgagtgaaatggagagccat
cctcccgcgcggggtgctggggacggggagcggagattgtccggctcaagcctctgctcc
agctcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggc
atgcattatgccccaatgggaatgcaccctatgggtcagagagcaaatatgcctcctgta
cctcatggaatgatgccgcaaatgatgcccccaatgggaggaccgccaatgggacaaatg
cctggaatgatgtcttcggtaatgcctggaatgatgatgtctcatatgtctcaagcttcc
atgcagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatct
ggtgcaaaatcaatgtggactgaacataaatcacctgatggaaggacttactactacaat
actgaaacaaaacagtctacttgggagaaaccggatgatcttaaaacacctgctgagcaa
cttttatctaaatgcccctggaaggaatacaaatctgactctggaaagccttactattac
aattctcaaacaaaggaatcccgctgggccaaacctaaagaacttgaggatcttgaagga
taccagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatc
aaagctgaagaaagcagtaagcaagaggagtgcaccacagcatcaacagccccagttcct
acaacagaaattccgaccacaatgagcaccatggctgctgcagaagcagcagctgctgtc
gttgcagcagccgccgctgccgcagcagccgccgctgcagccaatgccagttcttccacc
tctgcttctaatacagtgggtggaactgttccggctgttcctgagcctgaagttacttca
attgttgctactgttgtagataatgaaaacacagtaacaatttcaactgaggaacaagca
caacttactagtacccctgctgttcaggatcaaagtgttgaagtgtctagtaatgctgga
gaagaaacatcaaagcaggaaaccttagctgattttactcccaagaaagaagaggaggaa
agccaaccagcaaaaaaaacatatacttggaatacaaaggaggaggcaaagcaagcattt
aaagaattattgaaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaa
atgatcattaatgacccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcc
tttaatgcttataaagtccagacagagaaagaagaaaaagaagaagcaagatcaaagtac
aaagaggctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccaca
accagatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatca
gaacgtgatcgtcttgaaatctatgaagatgttttattctttctttcgaaaaaagaaaag
gagcaagcaaagcaattgcgaaagagaaattgggaagccttaaaaaacatacttgacaac
atggctaacgtaacatactcaactacttggtcagaagcccagcagtatctgatggataat
ccaacttttgcagaagacgaggaattacagaacatggataaagaagatgcattaatttgc
tttgaagaacatattcgtgctttagaaaaggaagaagaagaagaaaaacagaagagtttg
ctgagagaaaggagacgacagcgtaaaaacagagaatcttttcagatatttttagatgag
ctgcatgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaatt
agttctgacattagattcactaatatgcttggtcagccgggatcaactgcacttgacctt
ttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataataaaa
gatattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagactttgtg
gcagtaatcagttcaactaaaagatcaaccacactagatgctgggaacattaagttagct
tttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggct
cggaagatgaaacgaaaagaatctgcttttaagagtatgttgaaacaagctactcctcca
atagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcattt
gaggacataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgctt
gagcatgaatgtcagcatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaa
catcacaggaaacgttcccgttctcgatcggggtcagattcagatgacgacgacagccat
tcaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagtgct
gagtctgagagaagttacaagaagtcaaaaaaacataagaagaaaagcaagaagaggagg
cataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaagagaaagac
cgggaaagcgaaaaagagagaactagacaaagatcagaatcaaaacacaaatcacctaag
aaaaagactggaaaggattctggtaattgggatacttctggcagtgaactgagtgaaggg
gaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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