Pteropus alecto (black flying fox): 102898331
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Entry
102898331 CDS
T02993
Symbol
COL4A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04151
PI3K-Akt signaling pathway
pale04510
Focal adhesion
pale04512
ECM-receptor interaction
pale04820
Cytoskeleton in muscle cells
pale04926
Relaxin signaling pathway
pale04933
AGE-RAGE signaling pathway in diabetic complications
pale04974
Protein digestion and absorption
pale05146
Amoebiasis
pale05165
Human papillomavirus infection
pale05200
Pathways in cancer
pale05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102898331 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102898331 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102898331 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102898331 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102898331 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
102898331 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102898331 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
102898331 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102898331 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
102898331 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102898331 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pale04147
]
102898331 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
pale00536
]
102898331 (COL4A1)
Exosome [BR:
pale04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102898331 (COL4A1)
Glycosaminoglycan binding proteins [BR:
pale00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102898331 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102898331
NCBI-ProteinID:
XP_015442817
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MASDRYARLLGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGN
PGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGMKGDPGEILG
RVPGTLLKGERGFPGAPGTPGLPGLPGIQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSF
QGPKGDKGDQGVSGPPGXXXXXXXXXXMPGXAQFKEKGDFATKGDKGQKGEPGFQGMPGV
GEKGEPGKPGPRGKPGKDGEKGEKGSPGYSGDSGYPGLPGREGLKGDKGEAGPPGPPGIV
IGTGPLGEKGERGVPGLPGSRGEPGPKGFPGLQGQPGSPGISIPGQPGAPGYPGERGEKG
DQGFPGLSLPGPSGRDGPPGPPGPPGAPGRPGHTDGLVECQPGPIGDRGPPGVPGQPGLA
GEVGEKGQKGDSCLICDTEGLRGPPGPQGPPGEIGFPGQPGAKGDRGSPGRDGLEGLPGP
KGIPGLIGQPGAKGEPGEIYFDIRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKG
SPGSIGLKGDRGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQVGFPGNPGSPGQPGL
KGEAGRVVPLPGPPGAEGLPGSPGFEGPQGDRGFPGSPGRPGLPGEKGTVGQPGIGFPGP
PGPKGVDGLPGDVGLPGSPGRPGLNGLPGNPGVPGQKGEPGVGLPGLKGLPGLPGIPGTP
GEKGNXKKEHGAIGAPGLQGIRGDPGPPGFPGPKGAPGVPGIGPPGVMGPPGRQGPPGSS
GPPGVKGEKGFPGFPGLDMPGPKGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGPKG
EMGVMGTPGQPGSPGPAGVPGSPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMD
QVDMETMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGMXXXXXXHPGQPGPKGDPGISGTP
GAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGDKGAKGEKGQAGLPGIGIPG
RPGDKGDPGIAGFPGSPGEKGEKGSTGLPGMPGSPGPKGSPGSAGYPGSPGLPGEKGDKG
LPGLDGIPXXXXXXGLPGQPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGS
KGEKGSKGDVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGAPGRPVEGPKGDRGPQ
GQPGLPGPPGPSGPPGLPGLDGLKGDRGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGIP
GSKGDMGPPGVPGFQGQKGLPGLQGIKGDQGDQGFPGTKGLPGIPGPPGPYHVIKGEPGL
PGPEGPAGLKGLQGPPGPKGQQGVTGSVGIPGPPGSPGFDGAPGQKGETGPFGPPGPRGF
PGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNER
AHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNI
RPFISRCAVCEAPAMVMAVHSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASP
GSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSR
CQVCMRRT
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgataggtacgcgagattattagggttacaaggtgtcattgggtttccggga
atgcaaggacctgaggggcctcaggggccaccgggacaaaagggtgatactggagaacca
ggactgccaggaacaaaagggacaagaggacccccaggagcatcgggttaccctggaaac
ccaggacttcccggtattcctggccaagatggtccaccgggtcccccaggaattccagga
tgcaacgggacaaagggtgagagggggcctctggggcctccgggtttgcctggattcact
ggaaatcccgggccgccagggttgccaggaatgaagggtgatcctggtgaaatactgggt
cgcgtgcctgggaccctgttgaaaggtgaaagaggattccctggagccccaggaacacca
ggtttaccaggattgccaggcattcaaggtcccgttggccctccaggatttaccggccca
ccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatgggcttaagtttt
caaggaccaaaaggtgataagggtgatcaaggggtcagtggacctccaggannnnnnnnn
nnnnnnnnnnnnnnnnnnnnaatgccagganaagctcaatttaaagaaaaaggagacttt
gccacgaaaggagacaagggtcaaaaaggtgaacctggatttcagggaatgccaggagtt
ggagagaaaggtgaacctggaaaaccagggccccgaggaaaacctggaaaagatggtgaa
aaaggagaaaaagggagtccagggtattccggcgactcagggtacccaggactcccgggc
cgagagggtcttaagggagacaaaggtgaagcaggtcctccaggcccacctggaattgtt
atcggcacaggacccttgggagaaaaaggcgagcggggggtcccgggactgccaggatcg
agaggagagccaggccccaagggtttcccaggattacaaggccaaccaggctctccaggc
atctcaatcccagggcagcctggtgctcctggctaccctggtgaaagaggagaaaaaggt
gaccaaggatttccagggctgtctttgccaggaccaagtggaagagatggacccccgggc
cctcctgggccccctggagcccccggacgaccaggccacacagatggacttgtggaatgc
cagcccggaccaataggtgaccggggtcctcctggagttccagggcagccaggactggcg
ggtgaagttggagagaaaggtcaaaaaggagatagttgtctcatctgtgatacagaggga
cttcgtggaccccccgggccacagggacctccaggagaaataggtttcccgggacagcca
ggggccaagggtgacagaggttcacctggcagggatggtcttgaaggattgcctggtcct
aaaggtataccagggctgattggccagccaggggccaaaggagagcctggtgagatttac
ttcgacattcgactcaaaggtgacaaaggagacccaggttttccaggacaacccggtatg
ccaggcagagcagggtctcccggaagagatggccatccaggtctgcccggccccaaaggc
tccccgggttcaattggattaaaaggagatcgtggcccccctggaggagttggctttccc
ggcagccgtggcgacattggccctcctgggcctccagggtttggccccattggtcccgtt
ggagataaaggacaagtgggctttccaggaaaccctggatccccaggccagccaggtctc
aaaggtgaagcaggaagagtcgtgcctttacctggtccccctggagcagaaggacttcca
gggtccccgggttttgaagggccccaaggtgacagaggttttcctggatcccctggaagg
cctggtctccccggagagaagggcactgttggccagcctgggattggatttccagggcct
ccaggccccaaaggtgttgatggcttacctggagatgtgggacttccagggagtccaggt
cgcccaggacttaatggcttacctggcaacccaggtgtgcctggccaaaagggagagcct
ggagttggtctgccaggactcaagggattgccaggtcttcccggcattcccggcacacct
ggggagaagggaaacnaaaaaaaagagcatggagctatcggcgcccccggccttcaggga
atcagaggtgacccaggacctcctggattcccaggtcccaaaggagctccaggagttcct
ggtataggcccccctggagtgatgggcccgcctggaagacagggaccaccggggtcatca
ggccctcctggagtgaaaggggagaagggtttccccggattcccaggcctggacatgcca
ggccccaaaggagataaagggactcaagggctccctggcctcacgggacagtcggggctt
cctggtcttcctggacagcaggggacacccggacttcctgggtttccaggtcccaaggga
gagatgggcgtcatggggaccccagggcagcctggctctccaggaccagcgggcgtgcca
ggatcgcctggtgaaaaaggagaccatggctttccaggctcctcgggacccaggggagac
cctggcttcaagggtgataaaggagatgttggtctccctggcaagcctgggtccatggat
caagtggacatggagactatgaagggccagaagggagaccaaggagaaaaaggacaaatt
ggaccaactggtgataaaggatcccgaggagatcctgggacaccaggaatgnncnnnnnn
nnnnnnnggcaccctgggcagccaggacctaaaggcgatccaggcataagcggaacccca
ggtgctccaggacttcctggaccaaaaggatcggttggtgggatgggtctgccaggaaca
cctggagaaaaaggtgttcctggaatccctggcccacagggggtccctggcttacctgga
gataaaggagcaaaaggggagaaaggccaggcaggcctacctggcattggaattccagga
cggccaggggacaagggagatccagggatagcaggttttccaggaagtcctggagagaag
ggagaaaaaggaagcacggggctcccaggcatgcccgggtcaccaggccccaaaggatca
ccaggaagtgctggctatccaggaagccctgggttacctggagaaaaaggtgacaaaggc
ctcccgggattggatggcattccnnnnnnnnnnnnnnnnngaggtcttcctggacagcct
ggccctacaggcccagccggccagaaaggggagcctggcagtgatggaattccggggtca
gcaggagagaagggcgaaccaggtctacccggaagaggattcccagggtttccagggtcc
aaaggagagaaaggttcaaagggtgatgtgggtttcccaggattagctgggagcccagga
attcctggatccaaaggagagcaaggattcatgggtcctccggggccacaaggacagccg
ggattgcctggagctccgggtcgccctgtggaggggcccaaaggagaccgaggtccacag
ggacaacctggcctgccagggccccctggaccatcggggcctccagggctccctgggctt
gatgggctgaaaggtgacagaggaaacccaggctggccagggacccctggtgctccagga
cccaagggagacccaggattccaaggcatgcctgggattggtggctctccaggtattccg
ggttctaaaggtgacatgggacctccaggagttccaggatttcagggtcagaaaggtctc
cctggccttcagggaattaaaggagatcaaggagaccaaggtttccctggaaccaaaggt
cttccaggtatccctggacccccaggtccttaccatgtcatcaaaggggagccagggctc
cctggtcctgagggtcccgcaggtctgaaggggcttcagggacctccaggccccaaagga
cagcaaggtgtgacaggatctgtgggcatacccggaccgccaggtagtcccgggtttgat
ggtgctcctggccagaaaggagagacaggaccctttggacctcccggtccaagaggattt
ccaggaccaccaggccctgacgggttgccaggatccatgggtcccccaggcaccccatct
gttgatcatggctttcttgtgacaaggcacagtcaaacaatagatgacccacagtgtcct
cccggaaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaatgaacgg
gcccatgggcaggacttgggcacagctggaagctgcttgcgcaagttcagtacaatgccc
ttcctgttctgcaatatcaacaatgtctgcaactttgcttcccgaaatgactattcctac
tggttgtccactccagagcccatgccaatgtctatggcacccatcgctggggacaatatt
agaccatttattagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtgcac
agccagaccattcagatcccgccgtgccccaacgggtggtcctcactctggattggctat
tcctttgtgatgcacaccagtgctggtgctgaaggttctggccaagccctcgcatcccct
gggtcctgtctggaagagtttagaagtgcaccgttcatcgagtgccacggtcgtggaact
tgtaattactatgcaaacgcttacagcttttggcttgccactatagagagaaacgagatg
ttcaagaagcccacgccgtccaccttgaaggctggggagctgcgtacgcatgtcagtcgc
tgccaagtctgtatgagaagaacataa
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