Pteropus alecto (black flying fox): 102898513
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Entry
102898513 CDS
T02993
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102898513 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pale00536
]
102898513 (COL13A1)
Glycosaminoglycan binding proteins [BR:
pale00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102898513 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Gag_p30
Motif
Other DBs
NCBI-GeneID:
102898513
NCBI-ProteinID:
XP_015447666
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MDIPVPLEASINFQDGNLGFPVPLLLSQRDSDFSKIGPGSCGLLALALCSLALSLLAHFR
TAELQARVLRLEAERGEQQMEPAILGQVNQLLDEKWKLHSRRRREALKMSPGCHCPPGPP
GPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPG
PIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQCGEYPHREHLSSTLAALRSNQII
TLKLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPGPMGP
PGFPGPPGPKGDPGIQGYHGRKGERGMPGMPGKQGAKGAPGIAVAGMKGEPGTPGTKGDK
GAAGSPGLLGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQG
DKGEPGTTGEQGPAGPKGSKGEPGKGEMVDYNANINEALQEIRTLALIGPPGLPGQIGPP
GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKPGPAGIKGEDGHPGSL
GEKGEKGESGQAGPPGLDGPTGEKGEPGGQGRPGATGLPGPIGLPGFTGEKGEPGEKGDP
GVEVPGLPGPEGPPGTPGLQGIPGPKGEAGQDGAKGEKGVQGEKGDRGPLGLPGASGLDG
RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG
SRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKMPLREARGPFEIGEDGTLQQGHPVL
YYQPFSTTDLLNWKQHTPPYSEKPQAMIDLLESIFQTH
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggacatcccagtccctctggaagcgtctataaatttccaggatggaaacctgggcttc
cctgtgcccctactcctatcacaaagagattctgacttcagcaagatcggccccgggtct
tgcgggctgctggcactggctctctgctcgctggctctcagcctgctcgcccactttcgg
accgccgagctgcaggcccgggtgctgcgcctggaagcggagcgtggagagcagcaaatg
gagccggctattttgggacaagtcaaccaactgctggatgagaaatggaagctccactct
cgcagacgccgggaagccctgaagatgtccccagggtgtcactgccctccagggcctcca
ggtcccactggaagacctggcctcccaggggacaaaggcgccattgggatgcctggacgt
gtgggagtaaagggccaaccaggcgagaagggggccccaggagatgccgggatgtccatc
atcggtccccgaggtccccctggtcagccgggcactcgaggttttcctggatttccgggt
cccattgggctagatggcaaaccgggccaccccggaccaaaaggggaaatgggcctgaca
ggtccccgaggacagccgggacctcaaggacaaaaaggagaaaagggtcagtgtggagag
tacccacaccgggagcacctaagcagcactctagcagctctgcgctccaaccagataatt
accctaaagctgctgcctctcctcaattcagtgcgactggctccacccccagtcataaaa
aggcgaaccttccagggtgaacagggccaggccggcatccagggcccaccggggccacca
ggtccccctggaccgagtggacctctggggcccccaggacttccagggcccatggggcca
cccggctttcctgggcctcctggaccaaagggagacccggggatccagggctaccatggc
cggaagggagaacggggcatgccagggatgccgggcaaacagggagcgaagggggctcct
ggaatcgccgtggctgggatgaagggtgagccggggaccccaggaaccaagggggataag
ggggctgcaggctcccctgggctactcggcctcctggggcagaagggagagaaaggagat
gctggcaactccattggaggaggcagaggggagcccggtccaccagggctcccagggccc
ccggggccaaagggagaagctggtgttgatggccaggccggccccccaggacagcaggga
gacaagggagagcctggaacaactggagaacagggaccagctggccccaagggctccaag
ggagaaccagggaaaggagagatggtggattacaatgcaaacatcaacgaggctctccag
gagatccggacgctggccttgatcggtccccctggtcttcccgggcaaatcggcccacct
ggagctccagggatcccaggccagaagggggagattggactgccaggccctccaggacac
gatggggaaaagggacctcgaggcaaaccaggagacatgggccctcctggccctcaaggc
cccccaggaaagcctgggcctgcgggaataaagggagaagacggacacccagggagcctg
ggagaaaagggagagaaaggggagtcgggacaggcgggcccaccgggtctagatggccca
actggggagaaaggagaaccaggtggccaagggagacccggagcaacaggattgcctggc
ccaatcgggctcccgggatttacaggagaaaaaggagaacccggggagaagggtgaccca
ggagtagaggttcctgggctgccagggccagaggggcctcctggaactccgggcctccaa
ggtattcctggaccaaagggggaagcaggacaagatggagcaaaaggagagaagggtgtc
caaggagaaaaaggagaccgaggtcctttgggattacccggagcttcaggtttggacggc
aggcctgggccaccgggtactccaggaccaattggagttccaggccctgcgggaccaaag
ggcgagaggggcagcaaaggtgaccctgggatgacaggaccaacgggagcagctgggctt
cctggtttgcatggaccacccggggacaaaggaaaccggggggagagggggaagaaaggc
tctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgt
ccattgggcgaagacggcttaccagtccagggctgctggaacaagatgcccctccgagag
gcacgaggtccctttgagattggagaggatggcacactccagcaaggccaccctgtcctc
tactatcagccattcagcacaaccgacctcctcaactggaagcagcacaccccaccctat
tcggagaaaccccaggcgatgattgacctgctcgagtccatcttccaaactcattag
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