Pantoea alfalfae: K6R05_00115
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Entry
K6R05_00115 CDS
T09440
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palf03000
]
K6R05_00115
Transcription factors [BR:
palf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K6R05_00115
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_3
HTH_23
HTH_3
HTH_38
HTH_Tnp_ISL3
Crp
HTH_28
Sigma70_r4_2
HTH_Crp_2
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QZX95688
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Position
complement(24570..25553)
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AA seq
327 aa
AA seq
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MSLKAIAAVLGLSVTTVSRALNGYQDVAQETRKRIEEEAQRRGYRPNAAARRLKTGRANA
VGLVYPVIESSLSGSDFSDMLLALDHHLARHEINLLLLADKQQQSHSTLTRLLRSGAADA
LIVGHTTPDDSRLNALMQTSFRFLALGRSDLPATYAWFDVDHLAGSQLAVGWSLAQGRQR
IAWLGSNENSTRVRDRRQGYLTALGDVAPYAMAAVAPSRRAGYHQTREWLAEDPAPEVII
TDCAALAEGAALALQQAGRAAGEDAILLAGWEGLPRDAILDHPIAAICQATPHQAGEQVA
DMVIRLINGEPPETLQTLWQPWLQLPA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttaaagccatcgctgcagttttaggtctttccgttacgactgtcagccgcgcc
cttaatggttatcaggatgtcgctcaggagacgcgtaaacgcattgaagaggaagcgcag
cggcgcggctaccgacctaatgcggcggcccggcggctgaaaaccggccgtgctaatgca
gtagggctcgtttatccggtcattgaatcttcgctgagtggtagcgacttcagcgatatg
ctgctggcactggatcatcatcttgcccggcatgaaattaacctgctgttgctggcggat
aaacagcagcagagtcactcaaccctgacgcgcctgctgcgcagtggggccgccgatgcc
ctgatcgtcggccataccacgccagatgacagccgactgaatgcgctaatgcagaccagt
tttcgctttctggcgctgggccgcagcgatctgccagccacctatgcctggtttgatgtt
gatcaccttgccggttcacaactggcggtgggctggtcgctggcgcagggacggcagcgg
atagcctggctcggcagcaatgaaaacagcacgcgggtacgtgaccggcgtcagggttat
ctgacggcgctgggtgacgttgcgccttatgcgatggcggcagtcgcaccgtcgcgccgt
gcaggttatcaccagacgcgtgagtggctggcagaggaccccgcgccggaagtgattatc
accgactgcgctgcgctggctgaaggcgcagccctggcgctgcagcaggctggtcgggct
gcgggcgaagacgccattctgcttgcaggctgggaaggattaccgcgtgatgcgattctc
gatcatcccattgctgcgatttgccaggcaacgccgcatcaggcgggtgaacaggtggct
gacatggttatcaggctgatcaacggcgaaccgccggaaacgttacagaccctgtggcaa
ccctggctgcaattaccggcctag
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