KEGG   Pantoea alfalfae: K6R05_00425
Entry
K6R05_00425       CDS       T09440                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
palf  Pantoea alfalfae
Pathway
palf03030  DNA replication
palf03410  Base excision repair
palf03420  Nucleotide excision repair
palf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:palf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K6R05_00425 (polA)
   03410 Base excision repair
    K6R05_00425 (polA)
   03420 Nucleotide excision repair
    K6R05_00425 (polA)
   03440 Homologous recombination
    K6R05_00425 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palf03032]
    K6R05_00425 (polA)
   03400 DNA repair and recombination proteins [BR:palf03400]
    K6R05_00425 (polA)
Enzymes [BR:palf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K6R05_00425 (polA)
DNA replication proteins [BR:palf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     K6R05_00425 (polA)
DNA repair and recombination proteins [BR:palf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     K6R05_00425 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K6R05_00425 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH HHH_2 HHH_5
Other DBs
NCBI-ProteinID: QZX95742
LinkDB
Position
92774..95560
AA seq 928 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLAQYNPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDELRAQIEPLHEMVRAMGLPLLAVSGVEADDVIGT
LALEAERKGLSVLISTGDKDMAQLVTPAITLINTMSNTILGPEEVEQKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGSMQTIYDNLDKVADLGFRGAKTMATKLEQNR
DVAFLSYQLATIKTDVELALPCEELTVTEPDVEALQALFSRYEFKRWLSDLQDGKWLQGK
KSNTQAQKSLSDEPVPVAETSSVLPTENYVTILDQDLFDSWLEKLKNSEVFAFDLETDAL
DTLSANIVGISFAVAPGEAAYLPVAHDYLDAPDQLDRAAVLAQLKPLLEDDSAWKVGQNL
KYDRGVLKNYDIELAGIKFDTMLESYILNSVVGKHDMDSLAARWLNHKTVTFQEIAGKGK
NQLTFNQIALEQASHYAAEDADVTLQLHLKMWPELEKEAGPRKVFEQIEMPLLTVISRIE
RNGVLIDQAILAQHSKELTARLAELELKAHELAGEPFNLSSTKQLQVILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPLSGRVHTSYHQ
AVTATGRLSSADPNLQNIPVRNDEGRRIRQAFVAAKGYRIVAADYSQIELRIMAHLSQDK
GLLDAFAQGEDIHRATASEVFGVPLDKVSAEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLRYMENTRQLAASKGYVETIEGRRLWLPDIKSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIAVDEWLEQQNDNSVRMIMQVHDELVFEVKAEAVEAASQKI
RALMEGSVQLDVPLLVEVGVGDNWDEAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggcgcaaatagcagaaaatcccctcattctggtcgatggctcatcctatctttatcgc
gcatatcatgcgtttccgccgctgaccaatagtgcaggtgaacccactggcgccatgtac
ggcgtgctcaacatgctgaaaagcctgctggcgcaatataatcctagtcacgttgctgtg
gtgttcgatgccaagggcaaaaccttcagggacgagctgttcgagcattataaatctcat
cgtccgccgatgcctgacgaactgcgtgcgcaaatcgagccgctgcatgagatggtgcgg
gcgatgggtctgccgttgctggctgtgagcggcgttgaagccgatgatgtcatcggtacg
ctggcgctggaagcggagagaaaaggcctttcagtactaatcagcacaggcgacaaagat
atggcgcagctggtcacgccagccatcacgctgattaacaccatgagcaataccattctg
ggaccggaagaggttgagcagaaatatggtgtgccgccagctttgatcatcgattttctg
gccatgatgggcgacagctcagataacatccctggcgttcccggcgtgggtgagaaaacg
gcacaggctctgctgcagggcctgggcagcatgcagaccatttatgacaatctggacaag
gtagccgatctcggctttcgtggtgccaaaaccatggcgactaaacttgagcagaatcgt
gatgtagcctttctctcttatcagctggcgacaattaaaaccgacgttgagctggcgctg
ccctgtgaagagcttacggtcactgaacccgatgtcgaagcattgcaggcactgttcagc
cggtacgaattcaaacgctggctgagcgacctgcaggatgggaaatggctgcagggcaag
aagagcaatactcaggcgcagaaatcgctctccgatgagccggttcctgtggctgaaacc
agcagcgtattaccgaccgagaattatgtcaccattctggatcaggatcttttcgacagc
tggctggagaagctgaaaaacagcgaggtttttgcctttgatctggagaccgacgcgctg
gataccctgagcgctaacatcgtgggcatcagctttgcggttgcgcccggcgaagccgcc
tatctgccggttgcacacgactatctcgatgcgcctgatcagctggatcgcgcggccgtt
ctggcacagctcaagcccctgctggaagatgacagcgcctggaaagtgggccagaacctg
aaatacgatcgtggcgtgctgaagaattacgacattgaactggccggtatcaaattcgac
accatgcttgagtcctatattcttaacagcgtggtgggcaaacatgacatggatagcctg
gctgctcgctggcttaaccacaaaacggtcaccttccaggagatcgccggtaaaggcaaa
aatcagctgacgttcaatcaaatcgcattggagcaggcatcccattatgctgccgaagat
gccgatgtgaccctgcaattgcatctgaaaatgtggccagagctggagaaagaagcgggc
ccgagaaaagtcttcgagcagattgagatgccgttactgacggtaatttccaggattgag
cgtaatggcgtgttaatcgatcaggctattctggcgcaacactcgaaagagctgactgcc
cgactcgctgagcttgaattaaaagcgcatgagctggcgggagaaccctttaacctctca
tccaccaaacagcttcaggtgattctgtttgaaaaacagggtatcaagcccactaagaaa
acaccgggtggggcaccgtcaaccagcgaagaagtgttagctgagctggcactcgactat
ccgctgcccaaagtgattctggagcatcgcggcttatccaaacttaagtcgacctatacg
gataaattaccgctgatgatcaacccgctgagcgggcgcgtacatacctcttatcatcag
gccgttaccgccaccggtcgcttgtcatctgccgacccgaatcttcaaaacattccggta
cgtaatgacgaaggacgccgaatccgtcaggcctttgtggcggccaaaggctatcgcatt
gtggcggcagactattcgcaaatcgaactgcgtatcatggcgcatctttctcaggataaa
ggattactggacgcttttgcccagggcgaagatattcaccgtgccacggcatccgaagtg
tttggtgtaccactggataaggtcagcgcagaacagcgccgtagtgcgaaagcgatcaac
tttggtctgatctatggcatgagcgcatttggtctgtcgcgccagctgaacattggcgca
ggcgaagcgaaaaagtatatggatctctactttgaacgctatccgggcgtactgcgctat
atggagaacacccgccagctggcggcaagtaaaggctatgtcgaaacgattgaaggccgt
cggctgtggctgcccgatattaaatccagcaacgcgattcgccggaaagctgcagaacgt
gccgcgatcaatgcgccaatgcagggaacggcagcggatattatcaagcgggcgatgatt
gctgttgatgagtggctggaacagcaaaacgacaatagtgtcagaatgatcatgcaggtt
cacgatgaactggtgttcgaagtgaaagcggaggccgttgaagcagccagccagaaaatc
cgtgcgttgatggaaggtagcgtgcagctcgacgtgcctttactggttgaagtcggtgtg
ggtgacaactgggatgaagcccactga

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