Pantoea alfalfae: K6R05_00625
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Entry
K6R05_00625 CDS
T09440
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
palf
Pantoea alfalfae
Pathway
palf00540
Lipopolysaccharide biosynthesis
palf01100
Metabolic pathways
Module
palf_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K6R05_00625 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
palf01005
]
K6R05_00625 (waaA)
Enzymes [BR:
palf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
K6R05_00625 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
K6R05_00625 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
K6R05_00625 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
K6R05_00625 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
palf01005
]
Lipid A
K6R05_00625 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
QZX95782
LinkDB
All DBs
Position
complement(135799..137073)
Genome browser
AA seq
424 aa
AA seq
DB search
MTTIYTALLYFIQPLIWLRLWLRGRKAPAYRKRWAERYGYCVGKVKPDGIVLHSVSVGET
LAAIPLVRALRHRYPTLPITVTTMTPTGSERAQSAFGKDVHHVYLPYDLPGSINRFLDTV
NPRLVIIMETELWPNIIRILHQRNIPLVIANARLSARSAKGYRKLGKFMRQLLQSITLIA
AQNTEDGDRFLSLGLKRSQLAITGSLKFDISVTPELAARAVTLRRQWAPRRPVWIATSTH
EGEEAIVLDTHRRLLQTFPDLLLILVPRHPERFNDARELTQERGFSFILRSSGEIPSGST
QVVIGDSMGELMLLYGIADLAFVGGSLVERGGHNPLEPAAHALPVLMGPHIWNFKDICSK
LQEGQGLITVTDVISLEKEVTNLLQDDDYRRYYGRHAVDVLHQNQGALQRLLQLLEPHLP
PRAH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatttacaccgcattgctctacttcattcagccactgatctggctgcgcctg
tggctgcgcggtcgtaaagcgcctgcctatcgcaaacgctgggcagaacgctatggctat
tgtgtcggcaaagtgaagcccgacggcattgtgctgcactcggtttctgtgggtgaaacg
ctggccgcgattccgctggtgcgcgcactgcgtcatcgttaccccaccctgccgattacc
gtcactaccatgacgccgaccggctctgagcgggcgcaatctgcttttggcaaagatgtg
catcacgtctatctgccttatgatctgccaggttcgattaatcgttttctggatacggtt
aatccacggctggtgatcatcatggaaacggagctgtggccaaatattatccgcattctg
caccagcgtaacattccgttggtgatcgccaatgcccgcctctcggcccgctccgccaaa
ggctatcgcaagctggggaaattcatgcgccagctgttgcagagcatcacgctgattgcg
gcacagaatacggaagatggcgaccgcttcctgagtctgggcctgaaacgttcacagctg
gcgattaccggcagcctgaagtttgatatttctgtgacgccagagctggccgccagagcg
gtaacgctgcgtcgccagtgggcgccgcgtcgcccggtgtggatcgccaccagcacgcac
gaaggcgaagaggccatcgtgctggatacccatcgtcgcctgctgcagacgtttccggat
ctgctgctgattctggttccccgccatcctgaacgctttaacgatgcgcgcgaactgacg
caggaacgcggcttcagctttatcctgcgcagcagcggtgagatcccttcgggttccacg
caggtggtcatcggcgactcaatgggtgaactgatgctgctttacggcatcgccgatctg
gcgtttgtcggcggcagcctggttgagcggggcggacataacccgctggaacccgctgcc
catgcgcttccggtgctgatggggcctcacatctggaacttcaaagatatctgcagtaag
ttgcaggaaggccagggtctgattaccgtcaccgacgtaatttcactggaaaaagaggtc
accaacctgttacaggatgatgattatcgccgttattacggacgccatgcggtagacgta
ctgcaccagaaccagggtgcgcttcagcgtctgctacagttactcgaaccgcatctgcca
ccacgggcccactaa
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