Pantoea alfalfae: K6R05_00840
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Entry
K6R05_00840 CDS
T09440
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
palf
Pantoea alfalfae
Pathway
palf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6R05_00840 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_00840 (priA)
Enzymes [BR:
palf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6R05_00840 (priA)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6R05_00840 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QZX95823
LinkDB
All DBs
Position
complement(177759..179954)
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AA seq
731 aa
AA seq
DB search
MPVVQVALPVPLPRLFDYLPPQGVQPVIGGRVSVPFGNRRMIGIVVSFRDSSDLPEAQLK
RVVEVLDSESLYPPSLWRILNWAASYYHSPQGEVLSHAIPVLLRQGKAAQDNPLWRWEIT
EQGRETAPESLKRAPKQQQALAALRQQPLYRHQVSEHDLTEATLQALRAKGLCELHEHQP
QMHDWRTTYAVKGERLRLNTDQAMAVGAIRADDEHYAAWLLAGITGSGKTEVYLSVLENV
LARGKQALVLVPEIGLTPQTIARFRERFDAPIDVLHSALNDSERLAVWLRARRGETAIVI
GTRSALFTPLARPGVIIIDEEHDSSYKQQEGWRYQARDLAVFRAHEEDIPIVMGSATPAL
ETLHNVRSGKYRQLDLTKRAGNARPALQQLIDLKGVQLIGGLAPGLIGKIRQHLQADNQV
LLFLNRRGFSPALLCHDCGWIAECTRCDRYYTLHQHHRQLRCHHCDSQRPLPNQCPQCGS
THLLPVGVGTEQLEQQLGTLFPGVPVSRIDRDTTSRKGALEQHLADVHRGGARILVGTQM
LAKGHHFPDVTLVSLLDVDGALFSADFRAAERFAQLYTQVAGRAGRAGKQGEVMLQTHHP
EHPLLQTLLHQGYSAFAQQALLERQAVHLPPWSRHALFRAEDMDNQQAAEFLQQLRNLLE
ASPLNDKAMWFMGPLPALQPKRSGRWRWQLLLQHPSRQRLQQLLSSSLPLVSTLPAARKV
KWTLDIDPTES
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcaggttgccctgcccgtccccttgccccgcctgtttgattatctgccg
cctcagggtgtgcagccggtcattggcgggcgcgtgagtgtgccctttggcaatcgcaga
atgatcgggattgtggtctcctttcgtgacagcagcgatctgccggaagcacagctcaag
cgcgtggttgaggtgctggacagtgagtctctctatcccccgtcgctgtggcgcatcctg
aactgggccgccagctactaccactcgccgcagggtgaagtgctgagccacgcgattccg
gtgctactgcgccagggcaaagcggcgcaggacaatcccctatggcgctgggaaattacc
gagcagggccgtgaaaccgcgccggaaagtttaaagcgcgccccgaaacagcagcaggcg
ctggcagcactgcgtcagcaaccgctctatcggcatcaggtcagtgaacacgatcttacc
gaggcaacattacaggcattgcgggctaaaggattatgcgaactgcatgagcatcagccg
cagatgcacgactggcgcaccacttatgctgtaaaaggcgaacggctgcgactgaatacc
gatcaggcgatggccgtgggtgcgattcgggcagatgatgaacactatgccgcctggctg
ctggcgggcatcaccggctccggcaaaactgaggtttacctcagcgtgctggaaaatgtg
ctggcacggggtaaacaggcgctggtgctggtgccggagattggcttaaccccacaaacg
attgcccgctttcgggaacgttttgatgcgcccatcgatgtgctgcactctgcattaaat
gacagtgaacggctggcggtctggttacgtgcccggcgcggcgaaacggcgattgtgatt
ggtacccgctcggcgctgtttacgccgctggctcgtcctggcgtcatcattattgatgaa
gagcatgacagctcctacaaacagcaggaaggctggcgctatcaggcgcgcgatctggct
gtgttccgtgcccatgaagaggatatcccgattgtcatgggctcggcgacaccggctctg
gagacgctgcacaatgtccgcagcggcaagtatcgccagctcgacctgacaaagcgcgcc
ggcaacgcccgaccggcgctgcaacagcttatcgatttaaaaggcgtgcagctgatcggc
ggcctggcaccgggtctgattggtaaaatacgccagcatctgcaggccgacaatcaggtg
ttgctgtttcttaaccgccgcggcttttcacccgccctgctctgtcacgactgcggctgg
attgccgagtgtacccgctgtgaccgctactacaccctgcatcagcaccaccgtcagcta
cgctgccatcattgcgacagccagcgtccgctacctaatcagtgcccgcagtgtggctca
acccatctgctgccggtcggcgtcggtactgagcagctggagcagcagctcggcacactc
ttccctggcgtgccggtgtcgcgcatcgatcgcgataccaccagccgcaaaggtgccctg
gagcagcatctggctgacgtccatcgtggcggcgcacgtatcctggtcggcacccagatg
ctggccaagggccaccacttccccgatgtcacactggtctcgctgctggatgttgatggt
gccctgttctcagccgatttccgtgcggcggagcgctttgctcagctctacacccaggtc
gccggccgtgctggccgtgccggaaagcagggtgaggtgatgctgcagactcaccatccg
gaacaccccttactgcagacactgctgcatcagggttattcagcctttgcccagcaggcg
ctgctggagcgacaggcggttcacctgccaccctggagccgccatgcgctgttccgcgcg
gaagatatggataaccagcaggcagccgaatttttgcaacaacttcgtaacctgctggag
gcgagcccgctgaatgacaaggcgatgtggtttatgggtccgttgcccgctttgcagccc
aaacgcagtggacgctggcgctggcaactgctgttgcagcatccttcccggcaacgtctg
caacagttactgagcagttcgttgccgctggtttcaacgctccccgctgcgcgcaaagtg
aaatggacgctggatatcgacccgaccgagagctga
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