Pantoea alfalfae: K6R05_01300
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Entry
K6R05_01300 CDS
T09440
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_01300 (rnz)
Enzymes [BR:
palf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
K6R05_01300 (rnz)
Transfer RNA biogenesis [BR:
palf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
K6R05_01300 (rnz)
Prokaryotic type
K6R05_01300 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QZX95906
LinkDB
All DBs
Position
281743..282654
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AA seq
303 aa
AA seq
DB search
MHLTFLGTGGGAPSLQRNVTSIAFTRALSGETWLFDCGEGTQLQFMRSSLKPGKLEKIFI
THLHGDHIFGLPGLLTSRSMAGLTSPMTVYGPRGLKTFVETALSISGSYTDYLLNIVEIE
AGWTLDDGEFRISAWPLSHPVECYGYRIEQHDKPGLLDAGRLKAEGVPRGPWFQQLKQGE
CVTLEDGRVVNGADYLGPATPGKKLAIFGDTAPTEVALQLAADVDLMVHETTLEAAMMEK
ANGRGHSTTLQAAEVAKRAGAKRMIATHFSSRYLAKDMSRLLAECQTIFPCTELASDLAV
FTV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttacttttcttggcaccggcggcggtgctcccagtctgcaacgcaacgtgacc
tccattgcttttacccgtgcgctgagtggtgaaacctggctgttcgactgcggcgagggc
acacagttacagtttatgcgctccagcctgaaaccgggcaagctggaaaagatttttatt
acccatctgcatggcgatcatatttttgggctgccgggcttactcaccagccggtctatg
gccggactgacctcaccgatgacggtttatgggcccagaggattaaagacctttgttgag
acggcgctgtcgatcagcggctcctataccgactatctgctgaacatcgttgaaattgag
gcgggctggacgctggatgacggtgagtttcgtatcagtgcctggccgctgagccatccg
gtggagtgctatggctatcgcattgaacagcacgacaaacccggcctgctggatgccggg
cggctgaaagccgaaggggtgccccgcggaccgtggttccagcagctgaagcagggagaa
tgtgtgacgctggaggatgggcgggtggtcaacggggctgactaccttggcccggcgaca
cccggcaaaaagctggccatctttggcgatacggcacccacggaggtcgcgctgcaactg
gcggcagatgttgacctgatggtgcatgaaaccacgctggaggcggcgatgatggagaaa
gccaacgggcgcgggcactccacaaccctgcaggcggcggaggtggcaaagcgtgccggg
gcaaagcggatgatcgccacccatttcagctcccgctatctggcaaaggacatgagccgc
ctgctggcggagtgccagaccattttcccctgcaccgagctggcctcggacctggcggta
tttacggtttag
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