Pantoea alfalfae: K6R05_01530
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Entry
K6R05_01530 CDS
T09440
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palf03021
]
K6R05_01530 (rpoH)
Transcription machinery [BR:
palf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6R05_01530 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
HTH_AsnC-type
HTH_3
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QZX95950
LinkDB
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Position
333442..334299
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANTWPMLSAEEEKALAERLHYQGDLEAAKTLILSHLRF
VVHIARNYSGYGLPQADLVQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSADDESSEGRSMAPVLYLQDKTSDFADGIEEDNWDAHAADKLSYAMEGLDERSQHI
IRARWLDEDNKTTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctcttggcaacctggagtcttacgtc
cgggctgcgaatacctggccgatgctctcggctgaagaggaaaaagcgttggctgaacgg
ctgcattaccagggcgatctggaagcagcaaagacgctgatcctgtctcacctacgcttt
gtagttcatatcgctcgtaattactccggctatggtctgccacaggctgacctggtccag
gaaggcaacatcggcctgatgaaagcggtgcgtcgcttcaatcctgaagtgggcgtgcgt
ctggtttcgttcgccgtgcactggattaaagcggagattcacgaatacgtgctgcgtaac
tggcgtattgtgaaagtcgcgaccaccaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaatcaggacgaagtcgagatggttgcgcgcgag
ctgggcgtaagcagcaaagacgtgcgcgaaatggaatcgcgtatggccgcgcaggatatg
acctttgatatgtctgccgacgacgagagcagcgaaggccgttcgatggcaccggtgctg
tatctgcaggataaaacctctgactttgccgacggcatcgaagaggataactgggatgcg
catgcggctgacaagctgagctatgcgatggaaggtctggatgagcgcagtcagcacatc
attcgcgcccgctggctggacgaagacaataaaaccacgctgcaggaactggccgatcaa
tacggcgtatccgccgaacgtgtccggcagctggaaaagaacgccatgaagaaactgcgt
atggcgattgaagcgtaa
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