KEGG   Pantoea alfalfae: K6R05_01890
Entry
K6R05_01890       CDS       T09440                                 
Symbol
hofQ
Name
(GenBank) DNA uptake porin HofQ
  KO
K02507  protein transport protein HofQ
Organism
palf  Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:palf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palf02044]
    K6R05_01890 (hofQ)
Secretion system [BR:palf02044]
 Type II secretion system
  Type IVa pilus homolog protein
   K6R05_01890 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN P22_portal RND-MFP_C
Other DBs
NCBI-ProteinID: QZX96020
LinkDB
Position
410592..411863
AA seq 423 aa
MKRIATLLLLINCLLPVYAADEEPLSLTFDNAPVARILQALADYQQINLMIAPEVEGALS
LRLDNLPWHQALELVARMAKLTLIEQGNVLLVYPESWQQEQQQTRQAEQQARLLQEPLQQ
RAVILRYASASEVHASLLSERQSLMSERGSVTVDKRTNALLLRDTAAALKETERWIRALD
LPLEQIELSAHIVTISEEHLQELGVKWGLQAGDAAVTDILHHPRLDIPLAVSSPGVSVGM
ALARIGGQLLDLELSALEQENQIEIIASPRLFTSHQQTASIKQGTEIPYEVSAGNSGATS
IEFKEAVLGMEVTPTISGHGRIQLKIHISQNMPGRSIRTGDSDILSIDKQEIETQVTVSD
GQTLALGGIFQQQRSHGENKVPLLGKVPLIGGLFRQQSEQRKKRELVIFITPRLVREAAL
TAG
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaaaaggatagccactctgctgctgctcataaactgcctgctgccggtttacgccgct
gatgaggagcctctcagcctgacgtttgataacgcgccggtagcgcgcattttgcaggcg
ctggctgactatcaacagatcaacctgatgattgcgccagaagttgaaggggcgttatcg
ctgcggctcgataacctgccgtggcatcaggcgctggagctggtggcgcgcatggcaaag
ctgacgctgatagaacagggtaatgtcctgctggtctatccggaaagctggcaacaggaa
cagcagcagacacggcaggctgagcagcaggcccggttgctgcaggagcctttgcagcag
cgcgccgtgatattgcgttacgccagcgccagtgaggtgcatgccagtctgctgagtgag
cggcagtcgctgatgagcgagcgcggcagcgtaacggtcgacaaacgcaccaacgccctg
ttactgcgcgatacggcggcagcgttgaaagagacggagcgctggatacgggcgctggac
ctgccactggagcagatcgagctatcggcgcatatcgtcaccatcagcgaagagcatctg
caggagctgggtgtgaagtggggattgcaggcgggtgacgccgccgtgactgacatcctg
catcatccccggctggatattccgctggcggtcagttcgcccggcgtcagcgtgggtatg
gcactggcgcgcatcggcggtcagcttctggacctggaattaagtgcgctggagcaggag
aaccagattgaaatcatcgccagtccacgcctctttacctcacatcaacagaccgcgtcg
attaagcagggcactgagattccttatgaagtgtcggcgggaaacagcggagccaccagt
attgagttcaaagaagcggtgctgggcatggaggtgacaccgacgatttccgggcatggc
cgcatccagctgaagatccatatcagtcagaacatgccgggtcgcagcatcagaaccggc
gacagcgacatattatccattgataaacaggaaattgagacgcaggtcacggtcagtgac
gggcaaacactggcgttagggggtatctttcagcagcagcgcagtcacggagagaataag
gtgccgctgctgggaaaggtgccgctgattggcgggttgtttcgtcagcaatcagagcag
cgcaaaaaaagagagctggtgatcttcataacgccgcgattggtcagggaagcagcgctt
acggctggataa

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