Pantoea alfalfae: K6R05_02305
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Entry
K6R05_02305 CDS
T09440
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palf03009
]
K6R05_02305 (rsmB)
Enzymes [BR:
palf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K6R05_02305 (rsmB)
Ribosome biogenesis [BR:
palf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K6R05_02305 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_37
FtsJ
Methyltransf_25
MTS
Methyltransf_5
Cons_hypoth95
Methyltransf_15
Ubie_methyltran
TRM5-TYW2_MTfase
Methyltransf_33
FAM200-GTF2IRD2-like
Motif
Other DBs
NCBI-ProteinID:
QZX96101
LinkDB
All DBs
Position
complement(474498..475799)
Genome browser
AA seq
433 aa
AA seq
DB search
MTKSINLRSLSAQLIERVVDKGESLNTALPAAQKKLSDKDSALVQEICFGVLRTLPQLEA
LIGKLMERPLTGKQRVLHYLIMVGLYQLEYTRVPAHAALAETVAGAEVLKRTSLKGLLNG
VLRQFQRQREELLASIQDGPQRYLHPGWLLKRLQHVWPEQWQQIVEANNLRPPMWLRINR
QHQDRDAWLHKLVESGRNAQPADDVPDALRLDAPAPVSQLPGFDRGWVTVQDLSAQRCAL
LLEPQNGEQILDLCAAPGGKTTHILEIAPEAHVMAVDVDAQRLKRVEENLQRLGMKADIK
QGDGRTPQQWCGNRQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAKLQSEILDAI
WPHLKPGGTLIYATCSILPEENHQQIDAFLQRQHDAQAEPLWDASANGLQVFPEAEGGDG
FFYAKLIKKSGTN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcaatcaacctgcgtagcctctccgctcaacttattgagcgcgttgtcgac
aagggcgaatccctgaatacggcactccccgccgcccagaaaaaactctctgacaaagat
agcgcgttagtgcaggaaatctgttttggcgtattgcgcacattgccgcagctggaagcg
ctaatcggcaaactgatggagcgtccactgacaggcaaacagcgggttctgcactatctg
attatggtcggtctttatcagctggaatatacccgcgtacctgcccatgccgcactggca
gaaaccgtcgcgggcgccgaagtcctgaagcgtaccagcctgaaaggcttattaaatggt
gtattacgccagtttcagcgccagcgggaagagctgctcgccagcattcaggatggccca
cagcgttatctgcatccgggatggctgctaaagcgattgcagcatgtctggccggaacag
tggcaacagattgtggaagccaataatctgcgtccgccgatgtggctgcggattaaccgt
cagcaccaggatcgtgacgcgtggctgcacaagctggttgaaagtggcaggaatgcacaa
ccggctgacgacgtgccggatgcgctgcggcttgacgcccctgcccccgtcagtcagtta
cctgggtttgatcggggttgggtaaccgtgcaggatttgtccgctcagcgctgtgcgtta
ctgcttgaaccgcaaaacggcgaacagatcctggatttatgcgcggctcccggcggcaaa
acgacccacatccttgaaatcgcgccggaagcccatgtaatggccgtcgacgtggatgcg
caacgccttaaacgcgtggaggagaatctgcagcgactgggcatgaaagcagacattaaa
cagggtgatggacggacgccgcagcagtggtgcggtaatcgtcagtttgaccggattctg
ctggatgcgccctgctctgcaaccggtgttatccgacgccatcccgacattaagtggctg
cgtcgcgatcgtgatatcgctgagctggcaaagcttcagagcgaaattcttgatgctatc
tggccacaccttaaacccggcggtacgctgatttatgcgacctgctctatcctgccagaa
gagaatcatcagcagatagacgctttcctgcaacgccagcacgacgcccaggcggaaccg
ttgtgggatgcgtccgctaacgggttgcaggtattcccggaagccgagggcggagatggt
ttcttctacgctaagctgataaagaaatcgggtacaaactga
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