Pantoea alfalfae: K6R05_04025
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Entry
K6R05_04025 CDS
T09440
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_04025 (tcdA)
Transfer RNA biogenesis [BR:
palf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K6R05_04025 (tcdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
DAO
NAD_binding_7
TrkA_N
UDPG_MGDP_dh_N
3HCDH_N
ELFV_dehydrog
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QZX96410
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All DBs
Position
844362..845174
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AA seq
270 aa
AA seq
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MKVLNDAWHQRFGGTARLYGQNAMQRFADAHFCVIGIGGVGSWAAEALVRTGIGKITLID
MDDVCITNTNRQLHALQGNVGKAKTEVMAERLRAINPDCDVICIDDFITPENTAELMAAG
FDYVIDAIDSVRPKAALIAWCRRNKIPLITTGGAGGQIDPTQIQVADLAKTIQDPLAAKL
RERLKSLGVVKNSKGKLGIDCVFSTEALVYPQADGSVCASRSTAEGPKRMDCTSGFGAAT
MVTATFGFVAVSHALKKFLARAARQDAVSA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgttaaacgacgcctggcatcagcgctttggcggcacggcgcgtctctatggc
cagaatgcgatgcaacgttttgctgacgcacacttctgcgtcatcggtattggcggcgtc
ggctcctgggcagcggaagcgctggtgcgcaccggcattggtaaaatcaccctgatagat
atggatgacgtctgcattaccaacaccaaccgacagcttcatgcgctgcagggtaacgtc
ggtaaagccaaaacggaggtgatggccgagcggctgcgggcgatcaatccggactgcgac
gtgatctgcattgatgactttatcacgcccgagaacaccgccgaactgatggccgccggt
ttcgactatgtgatcgacgcgatcgacagcgtgcggcctaaagcggcgctgatcgcctgg
tgtcgccggaataagatcccgttgatcaccaccggtggcgcgggtgggcagattgatccg
acccagatccaggtcgccgatctggcaaaaaccattcaggatccgcttgcggcgaagctg
cgcgaacgcttgaaaagcctgggcgtggtgaaaaacagcaaaggcaaactcggcatcgac
tgcgttttttcgactgaagcgctggtctatccgcaggccgacggcagcgtctgtgcttca
cgcagcacggcagagggtccgaagagaatggattgcacatccggctttggcgcggcaacc
atggtgaccgccaccttcggctttgtggccgtttcgcatgcgctcaaaaaatttctggcg
cgcgccgcccgtcaggatgcggtcagcgcctga
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