Pantoea alfalfae: K6R05_04235
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Entry
K6R05_04235 CDS
T09440
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_04235 (truD)
Enzymes [BR:
palf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K6R05_04235 (truD)
Transfer RNA biogenesis [BR:
palf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6R05_04235 (truD)
Prokaryotic type
K6R05_04235 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QZX96451
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Position
889948..890988
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AA seq
346 aa
AA seq
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MTLNYLHGTPTAVGVIKANPEDFVVVEDLGYGADGEGEHLLVRIRKVGANTRFVAEALAK
YLGIHQRDMSYAGMKDRHAVTEQTLCFRLPGNAMPDLRGFSLEGVDILQVVRHKRKLRIG
ALAGNAFRLVIRQISDRDAVETRLAQIRDAGAPNYFGEQRFGRGGNNLEMAEKWARNEII
IRDRNKRSLMLSAARSALFNQVTSARLQKQGSLTQVLNGDALQLTGRGSWFVAQPDELAE
SQRRVEQHELRITAPLPGRGEPGPQADALAFEQQALADESLLLELMEREKVDAARRAMLV
VPRDMQWSWWDDVTLELAFWLPAGSFATSVVRELLTQTDAPDQPDE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgaattacctgcacggcacgcccacagccgtcggcgtgatcaaagccaacccg
gaagatttcgtggtggtggaagacctcgggtatggcgcggatggggaaggtgagcatctg
ctggtgcgtatccgtaaggtcggggccaatacccgctttgtggcggaggcgctggctaag
tatcttggtattcatcagcgcgacatgagctatgccgggatgaaagaccgccatgcggtc
acggagcagaccctctgttttcgtctgccaggcaatgcgatgcccgatctgcgtggtttt
tcgcttgagggcgtcgacattctgcaggtggtacgccacaagcgtaagctgcgcatcggc
gcactggcagggaatgcgttccggctggtcattcgccagatcagcgatcgtgatgcggtt
gaaacgcgtctggcgcagattcgcgatgcgggcgcgcccaactattttggtgaacagcgt
tttggtcgcggcggcaataacctggagatggcggaaaagtgggcgcgcaatgagatcatt
attcgcgaccgcaacaagcgcagcctgatgctttctgccgcacgcagtgcgctgtttaat
caggtgaccagtgcgcgtctgcaaaagcagggcagcctgacgcaggtgctcaacggcgat
gctttgcagctgactggccgtggcagctggtttgttgcccagcctgatgaacttgcagag
tcacagcgccgggttgaacagcatgagctgcgcattaccgcgccgctgcccggacgcggt
gagcctggcccgcaggctgacgcgctggcctttgagcagcaggcgctggcggatgagtcg
ctgctgctggaattaatggaacgtgagaaggtcgatgccgcccgccgcgccatgctggtg
gtgccgcgcgatatgcaatggagctggtgggatgacgtcacgctggaactggcgttctgg
ctgcctgcgggtagctttgccaccagcgtggtccgggagctgctgactcaaacggatgcg
cccgatcagcctgatgagtaa
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