Pantoea alfalfae: K6R05_05045
Help
Entry
K6R05_05045 CDS
T09440
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
palf
Pantoea alfalfae
Pathway
palf00260
Glycine, serine and threonine metabolism
palf00460
Cyanoamino acid metabolism
palf00630
Glyoxylate and dicarboxylate metabolism
palf00670
One carbon pool by folate
palf00680
Methane metabolism
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01120
Microbial metabolism in diverse environments
palf01200
Carbon metabolism
palf01230
Biosynthesis of amino acids
palf01240
Biosynthesis of cofactors
palf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K6R05_05045
09102 Energy metabolism
00680 Methane metabolism
K6R05_05045
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K6R05_05045
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K6R05_05045
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K6R05_05045
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K6R05_05045
Enzymes [BR:
palf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K6R05_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QZX96593
LinkDB
All DBs
Position
1047127..1048380
Genome browser
AA seq
417 aa
AA seq
DB search
MLKRDMNIADYDAELWQAMEQETVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVAYGIDETGKIDYDELAELAKTHKPKMIVGGFSAYSGV
CDWAKMREIADSVGAWLFVDMAHVAGLIAADVYPSPIPHAHIVTSTTHKTLAGPRGGIIL
AKNGDEDFYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKTYQQQVAKNAKAMVE
VLIERGYDIVSGGTHNHLFLIDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAVTRRGFKEADVRELAGWIADVLDNINDEATIERTKKKVLDICSRLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgatatgaacattgccgattacgatgccgagttgtggcaggcgatggag
caggagacagtgcgtcaggaagagcacattgaactgattgcttctgaaaactacaccagc
ccgcgtgttatgcaggcacagggttctcagctcaccaataaatacgctgaaggctatccg
ggcaaacgctactacggcggctgtgagtacgttgatatcgttgagcagctggcgatcgat
cgcgcaaaagaactgtttggtgccgattacgctaacgtgcagccacactcaggttcacag
gctaattttgcggtttacaccgcgctgctgcagccgggcgatactattctggggatgaac
ctggcgcacggtgggcacctgactcacggctcaccggttaacctgtccggcaaactctat
aacgtggtggcttacggtatcgatgagaccggtaaaattgactacgacgaactggctgaa
ctggcgaaaacccacaagccaaaaatgatcgtaggcggattctcggcgtactccggcgtc
tgtgactgggcgaaaatgcgcgaaatcgcagacagcgtgggagcctggctgtttgtcgat
atggcacacgttgctggcctgattgctgctgacgtttacccaagtccgatcccgcatgcg
cacatcgtgacctccaccacccacaaaacgctggcgggtccgcgcggcggcatcattctg
gcgaaaaacggtgatgaagatttctataagaaactgaactctgctgtcttccctggcggt
cagggtggtccactgatgcacgttatcgccggtaaagcggttgccttcaaagaggcgatg
gagccggagttcaaaacctaccagcagcaggtggcaaaaaacgccaaagcgatggtagaa
gtgctgatcgagcgtggctatgacatcgtgtctggcggcacgcataaccatctgttcctg
atcgatctggtgagcaagaacctgaccggtaaagaagccgatgcggcgctgggccgtgcc
aacatcacggttaacaagaacagcgtgccaaacgatccgaaaagcccgtttgtgacgtct
ggtatccgtatcggtacaccagcggttacccgtcgtggcttcaaagaggcagacgtacgc
gagctggctggctggatcgccgatgtgctggataacatcaatgacgaagcgaccattgag
cgcaccaagaagaaagtgctggatatctgcagccgtctgccggtctacgcttaa
DBGET
integrated database retrieval system