Pantoea alfalfae: K6R05_06165
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Entry
K6R05_06165 CDS
T09440
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palf03032
]
K6R05_06165 (gyrA)
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_06165 (gyrA)
Enzymes [BR:
palf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K6R05_06165 (gyrA)
DNA replication proteins [BR:
palf03032
]
Prokaryotic type
DNA Topoisomerases
K6R05_06165 (gyrA)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6R05_06165 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
QZX96794
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Position
1288222..1290894
Genome browser
AA seq
890 aa
AA seq
DB search
MSDLAREITPVNIEEELKNSYLGYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLREVINGCLAYIEDENISIEALMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVEADAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILDAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPNPAEAKAGLIAQAWDLGNV
SAMLERAGDDAARPEWLDPQYGIRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKA
LLEQIAELLHILSSAERLMEVIREELELMRDQFGDDRRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYTEGFNIFMATALGTVKKTAL
KEFSRPRSAGIIAVNLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAETAVRAMGRTASG
VRGIRLAEGDRVVSLIVPREEGAIMTVTQNGYGKRTANSEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVALQRVA
EPVEEEELDSIDGSVAEGEDDIAPEAEIDDEEIAPEADAEDEDDAAEDEE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaatatcgaagaagaattaaagaattct
tacctcggttacgccatgtcggtcatcgttggccgagctttacccgatgtgcgtgatggc
ctgaagccggttcaccgtcgcgtactctatgcgatgagcgtactgggtaacgactggaac
aaaccctataaaaaatctgcccgcgtcgtcggtgacgttatcggtaaatatcacccgcat
ggtgattccgccgtttacgacaccattgtacgtatggcccagcctttctccctgcgttac
atgctggtggacggacaaggcaacttcggttccatcgacggcgactccgctgcagcgatg
cgttataccgaaattcgcatgtcgaaaatcgcccacgacctgttagctgacctggaaaaa
gagaccgtcgatttcgtaccgaactatgacggcactgagcagatccctgaagttctgccg
accaaaatccctaacctgctggtgaacggttcttccggtatcgccgtgggtatggcaacc
aacattccaccgcacaacctgcgtgaagtgattaacggctgcctggcgtacattgaagat
gagaacatcagcattgaagcgctgatggagcacattccggggcctgatttcccgaccgcc
gccatcatcaatggtcgccgtggcatcgaagaagcgtaccgcaccggacgcggcaagatt
tacattcgcgcacgtggcgaagtggaagccgatgcgaaaacgggccgcgagaccatcatc
attcacgagctgccgtatcaggtgaacaaagcacgcctgattgagaagattgcggagctg
gtgaaagagaagcgtgtcgaaggcatcagcgcactgcgcgatgagtctgataaagacggc
atgcgcatcgtgattgaaatcaagcgtgatgcggtcggcgaagtggtgctgaataatctc
tattcactgacccagttgcagacatcgtttggcatcaatatggtggcgctgcatcagggc
cagccgaagattatggcgctgaaggaaattctggatgcctttgttcgccatcgtcgtgaa
gtcgtaacgcgtcgtaccatctttgaactgcgtaaagcccgtgaccgcgcgcatatcctg
gaaggtctggcgattgcgctggcgaatatcgatccaattatcgagctgattcgtcgtgca
ccaaacccggcagaagcgaaagcgggtctgattgcacaggcgtgggatctgggtaacgtg
tcagcgatgctggagcgtgccggtgatgacgccgcgcgtcccgagtggctggatccgcag
tacggcatccgtgatggtcagtactatctaaccgagcagcaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggccttgagcacgagaagctgctggatgagtataaggca
ctgctggagcagatcgctgagttgctgcacattctgtcgagcgctgagcgtctgatggaa
gtgatccgcgaagagctggagctgatgcgcgatcagtttggcgacgatcgtcgtacagag
atcaccgcaaataccgccgatattaacatcgaagacctgatcaatcaggaagatgttgtg
gtgacattgtcgcatcagggctatgtgaagtatcagccgctgaccgactatgaagcgcag
cgtcgtggtggtaaaggcaagtcagccgcacgtatcaaagaagaggacttcattgatcgt
ctgctggtggcgaatacccacgacacgattctttgcttctcaagccgtggccgtctctac
tggatgaaggtttatcagctgccggaagcgagtcgtggcgcacgtggacgtccaatcgtc
aatctgctgccgctggaagccaacgagcgtattacggcgattctgccggtacgtgagtat
accgaaggcttcaatatctttatggcaaccgcgctgggtaccgtgaagaagactgcgctg
aaagagttcagtcgtccgcgtagcgccggcattattgccgtgaatctgcgtgatgacgat
gagctgatcggtgtggcgctgaccaacggtaatgacgaagcgatgctgttctcagcggcc
ggtaaagtggtgcgcttcgcagaaaccgcagttcgtgccatgggtcgtaccgcttctggc
gtgcgcggcatcaggctggctgaaggcgatcgtgtcgtgtcgttgattgtgccgcgtgaa
gagggtgccattatgaccgtaacgcagaatggttacggtaagcggactgccaacagcgaa
tacccgaccaagtcgcgtgcgacgcagggtgttatttcaatcaaagtgactgaacgtaat
ggtccggtaattggcgcggttcaggttgtcgatggcgatcagattatgatgatcaccgat
gccggtacgctggtgcgtactcgcgtttcagaagtgagcgtcgtgggtcgtaatacccag
ggtgtgatcctgattcgtaccgcagaggatgagaacgtagtcgctctgcagcgtgttgcc
gagccggttgaagaagaagagctggattcaatcgacggcagcgtggcggaaggcgaagat
gatattgcgccggaagctgagattgacgatgaagagattgcaccggaagcggatgcagaa
gacgaagacgacgcagctgaagacgaagagtaa
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