Pantoea alfalfae: K6R05_06570
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Entry
K6R05_06570 CDS
T09440
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
palf
Pantoea alfalfae
Pathway
palf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6R05_06570 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_06570 (mdtC)
Transporters [BR:
palf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6R05_06570 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QZX96870
LinkDB
All DBs
Position
complement(1402872..1405946)
Genome browser
AA seq
1024 aa
AA seq
DB search
MKFFALFINRPVATTLLTLAIALAGMLGFRLLPVAPLPQVDFPVIVISASLPGASPEIMA
SSVATPLERSLGRIAGVSEMTSTSSLGSTRIILVFDFDRDINGAARDVQAAINAAQSLLP
TGMPTRPTYRKVNPSDAPIMIMTLTSDTYNPGQLYDYASTQLAQKLSQIEGVGDVTVGGS
SLPAVRVALNPQALFNQGVSLDAVRTAISNANQRRPQGALDDAQQRWQLRTNDALQTARE
YQPLVVHYKNGAAVKLSDVATVEDSVQDVRNAGMSRGKPAVLLLIRKTPEANVIDTVDRI
RAEMPLLHEVIPAAIDLQIAQDRSPTIRASLHEVEQSLLIAVALVILVVFVFLRSGRATL
IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHVEAGMKP
LAAALKGVREVGFTVLSMSLSLVAVFLPLLMIGGLIGRFFSEFAITLSVSIIISLFISIT
LTPMMCAYLLKPHGPRSQPRRRSAGRLLMALQQGYGRSLNVVLNHARWVMLLFFATIFLT
GWLFVHIPKTFMPEQDTGRLSGFISADQSISFQAMRSKLQDFMEIVGADPAVDSVVGFTG
GMRTNSGSMFISLKPLSERKESAVEIIARLRTKLAKEPGASLYLNAVQDLRAGGRESNAG
YQYSLLSDDLAALRTWEPKIREAFSALPQLADVNSDQQDKGSEMALTYDRESMARLGIDV
SQANALLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALSQMFVINSEGKAIPLSW
FAHWQPANAPLSVNHEGLSAASTISFNLPEGVSLSQASEAIERTMTAIGVPSSVRGSFAG
TAQVFQQSQSSQLWLMLAAIAAVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFDT
PFSLIALIGILLLIGIVKKNAIMMVDFALEAERNGQLSAREAIFQACLLRFRPILMTTLA
ALFGALPLVLSSGDGAELRQPLGITIAGGLVMSQLLTLFTTPVVYLMMDKLRRRKRPLAA
AQQP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttctttgccctgttcatcaaccggcccgtcgcgacgaccctgctgacgctggcc
atcgccctggcgggcatgctgggtttccggctgctaccggtagcaccgctgccgcaggtc
gatttcccggtgattgtcatctcggcatcactgccgggtgcctcaccggagattatggcg
tcgtcggtggccacgccgctggagcgctcgctgggacgcatcgcgggcgtcagtgaaatg
acctccaccagttcgctgggcagcacccgcatcattctggtgttcgattttgatcgcgat
atcaatggcgcggcgcgcgatgtgcaggccgcgatcaatgcggcgcagagcctgctgccc
acaggcatgccgacgcgtcccacctatcgcaaagtaaacccttctgatgcgccaattatg
atcatgacgctgacctcggatacctacaatcctggtcagctctatgattacgcctcgacc
cagctggcacaaaagctgtcgcagatcgagggcgtgggcgacgtcaccgtgggcggcagt
tcgttgcctgcggtgcgtgtggcgctcaatccgcaggcgctgtttaatcagggcgtgtcg
ctggatgcggtgcgcaccgcgatctcgaacgccaaccagcgtcggccgcagggcgcactg
gatgacgcgcagcagcgctggcagttgcgtaccaatgacgcgctgcagaccgcccgtgag
tatcagccgctggtggtgcattacaaaaacggtgcagcggtgaagctgtccgatgtggcg
accgtcgaggattcggtgcaggacgtgcgtaacgccgggatgtcgcgcggtaaacccgcg
gtgctgctgctgatccgcaaaacgcctgaagccaacgtcatcgatacggttgaccggatc
cgtgccgaaatgccgctgctgcatgaggtgatcccggccgccatcgatctgcagattgct
caggatcgctcgcccaccattcgcgcctcgctgcatgaagtggagcagtctctgttaatc
gccgtggcgctggtgatcctggtggtgtttgttttcctgcgctcggggcgtgccacgctg
atccccgccgtcgccgtgccggtttcgctgatcggcacctttgccgcgatgtacctgtgc
ggcttcagcctgaataacctgtcgctgatggcgctcactatcgccaccggctttgtggtg
gatgatgcaatcgtagtgctggagaacattgcccgccatgtcgaagcgggcatgaaaccg
ctggccgccgcgctgaaaggggtacgggaagtcggctttaccgtgctgtcgatgagccta
tcgctggttgccgtgttcctgccgctgctgatgatcggcggcctgattggccgtttcttc
tctgagtttgccattacgctgtcggtgtctatcatcatctcgctgtttatctccatcacc
ctgacaccgatgatgtgcgcgtatctgctgaagccccacgggccgcgcagccagccccgt
cgccgcagcgcaggccggctgctgatggcgcttcagcagggttatggtcgctcgcttaac
gtggtattgaaccatgcacgctgggtcatgctgctgtttttcgccaccattttcctgacc
ggctggctgtttgttcatatcccgaaaacctttatgccggaacaggataccgggcgactc
tccggctttatctctgctgaccagagcatttcgtttcaggcgatgcgcagtaaactgcag
gattttatggagatcgtcggtgccgatcccgctgtagacagcgtggtgggctttaccggt
ggcatgcgcaccaacagtggctccatgtttatctcactgaagccgctgtcagagcgcaaa
gagagtgccgtggagatcatcgcccggttgcgtacaaagctggcgaaagagccgggcgcc
agcctctacctgaatgcggtgcaggatctgcgcgcaggtggccgggagtcgaatgccggt
tatcagtattcgctgctatcggacgatctcgccgcgctgcggacgtgggagccgaaaatt
cgcgaggcgttctctgccctgccgcagctggcggatgtgaactccgatcagcaggataaa
ggcagcgagatggcgctgacctatgaccgggaaagcatggcgcggctcggcatcgatgtc
tctcaggccaatgccctgctgaataacgcctttggtcagcgtcagatctccaccatctac
cagccgcttaaccagtacaaagtggtgatggaggtcgatccacgctacacccaggatatc
agcgccctgtcgcagatgttcgtgataaacagcgaaggtaaagcgattccgctgtcgtgg
ttcgcccactggcagcccgcgaatgcgccactctcggtcaatcatgaagggctgtctgcc
gcctcgaccatctcattcaacctgccggaaggtgtgtcgctgtcgcaggcatcggaggca
attgaacgcaccatgaccgcgattggcgtgccctccagcgtgcgcggcagctttgccgga
accgcgcaggtgtttcagcagtcgcagagcagccagctctggctgatgctggcggcgata
gcggcggtctatatcgtgctggggatcctctatgagagctatgtccatccgctgacgatc
ctctctaccctgccttcggcgggtgtcggcgcgctgctggcactggaactgtttgatacg
cccttcagcctgattgcgctgatcgggattctgctgctcatcggcattgtgaaaaagaac
gccatcatgatggtcgactttgcactggaggcagagcgaaacggccagctcagcgcgcgc
gaggcgatattccaagcctgcctgttacgcttccggcccattttgatgaccacgctggcg
gcgctgtttggcgcgctaccgctggtgctgagcagcggcgacggtgctgaactgcgccag
ccgctggggattaccatcgcgggcggactggtgatgagtcagctgctgacgctcttcacg
acgccggtcgtctatttaatgatggataagctgcggcgcagaaaacgcccgctggccgct
gcgcagcagccgtaa
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