Pantoea alfalfae: K6R05_08080
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Entry
K6R05_08080 CDS
T09440
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
palf
Pantoea alfalfae
Pathway
palf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K6R05_08080 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palf01007
]
K6R05_08080 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_08080 (aspS)
03029 Mitochondrial biogenesis [BR:
palf03029
]
K6R05_08080 (aspS)
Enzymes [BR:
palf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
K6R05_08080 (aspS)
Amino acid related enzymes [BR:
palf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K6R05_08080 (aspS)
Transfer RNA biogenesis [BR:
palf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K6R05_08080 (aspS)
Prokaryotic type
Other AARSs
K6R05_08080 (aspS)
Mitochondrial biogenesis [BR:
palf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
K6R05_08080 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QZX97144
LinkDB
All DBs
Position
1740515..1742293
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AA seq
592 aa
AA seq
DB search
MRTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLA
SELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSEPLPLDSNQTNSEEA
RLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
APQVREIMERLIRNLWQDVQGIDLGAFPQMTFAEAMHRYGSDKPDLRNPMELVDVGDLLK
NVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNVRADG
LEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGADRAKVVADALGALRLKVGRELNIT
DENAWAPLWVIDFPMFEEDEEGGLAAMHHPFTAPKEMSAEELAADPTRAVANAYDMVING
YEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKEKPENK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagaatattgcggacagctcaatctgtctcatgtgggtcagcaagtcacgctt
tgcggctgggtaaaccgccgtcgcgatctgggcagtttgatttttatcgacatgcgcgac
cgtgaaggcatcgtgcaggtattttttgatcccgatcgtcaggacgcatttaagctggct
tctgaactgcgtaacgaattctgcatccagatcaccggtactgtgcgcgcacgcgatgag
aagaacaaaaacagcgacatggcgaccggcgaagtcgaagtgtttgcccaggcgctgacc
attatcaaccgctctgagccactgccgctggactccaaccagaccaacagcgaagaagcg
cgcctgaaataccgctacctggatctgcgtcgccctgagatggtgacgcgtttgaaaacc
cgcgcaaaaatcaccagctttgtccgtcgctttatggatgacgaagggttcctggatatc
gaaaccccgatgctgaccaaggcgacgccagaaggcgcgcgcgactatctggtgccaagc
cgggttcacaaaggcaaattctatgcgctgccgcagtcaccacagctgttcaaacagctg
ctgatgatgtccggctttgaccgctactatcagatcgtaaaatgcttccgcgatgaagat
ttacgtgccgatcgtcagccagagtttacccagatcgacgtagaaacctcctttatgact
gcgccacaggtgcgcgaaatcatggagcgtttaatccgcaatctgtggcaggacgtgcag
ggcatagatctcggtgcgttcccgcagatgacctttgcggaagcgatgcatcgctacggt
tccgataagccggatctgcgtaacccgatggagctggtggacgttggcgacctgctgaaa
aacgtggagttccaggtcttctctggcccggctaacgacgaaaaaggccgtgttgccgcg
ctgcgtgtaccgacgggtgcgcagctgagccgtaagcagattgatgaatatggcaaattc
gtggagatttacggcgcgaaagggctggcgtggatgaaggttaacgtccgtgcagatggc
ctggaaggcgtgcagagtccggttgccaagttcctgaatgcagagatcgttgaaggcatt
ctgagccgtaccggcgcgcaggatggcgacattatcttctttggtgctgaccgcgccaaa
gtggtcgctgacgcactgggtgcgcttcgcctgaaagtgggccgcgagctgaacatcacc
gatgagaacgcctgggcaccgctgtgggtgatcgacttcccgatgttcgaagaggacgag
gaaggcggtctggccgccatgcaccatccgttcactgcgccaaaagagatgagcgcagaa
gaactggcagccgacccgacacgtgccgtggcgaatgcttatgacatggtgatcaacggt
tatgaagttggcggcggttcagtgcgtatccacaacggcaaaatgcagcagacggtgttc
agcattctgggtattgaagagcatgagcagcgcgagaagtttggcttcctgctggatgcg
ctgaagttcggtacaccaccgcatgcaggcctggcttttggtctggatcgcctgaccatg
ctgctgaccggcaccgacaacattcgtgacgttatcgcgttcccgaaaaccacggcggca
gcctgcatgatgaccgaagcgccaagcgaagcgaacccggcttctctgctggagcttggc
atccaggtggttaaaaaagaaaagcctgagaataaataa
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