Pantoea alfalfae: K6R05_08445
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Entry
K6R05_08445 CDS
T09440
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
palf
Pantoea alfalfae
Pathway
palf00061
Fatty acid biosynthesis
palf00071
Fatty acid degradation
palf01100
Metabolic pathways
palf01212
Fatty acid metabolism
palf02024
Quorum sensing
palf04146
Peroxisome
Module
palf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K6R05_08445 (fadD)
00071 Fatty acid degradation
K6R05_08445 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K6R05_08445 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6R05_08445 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
palf01004
]
K6R05_08445 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palf04147
]
K6R05_08445 (fadD)
Enzymes [BR:
palf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K6R05_08445 (fadD)
Lipid biosynthesis proteins [BR:
palf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K6R05_08445 (fadD)
Exosome [BR:
palf04147
]
Exosomal proteins
Exosomal proteins of breast milk
K6R05_08445 (fadD)
Exosomal proteins of breast cancer cells
K6R05_08445 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QZX97212
LinkDB
All DBs
Position
1816375..1818051
Genome browser
AA seq
558 aa
AA seq
DB search
MNKVWLKRYPADVPAEISADRYTSLVDLFEQAVKRYADQPAFLNMGQKMSYRQLEEKSRA
FAAYLQHQLGLKAGDRVALMMPNLLQYPVALFGVLLAGMVVVNVNPLYTPRELKHQLNDS
GASAIVIVSNFAHTLEKVVAETAVRHVILTRMGDQLAPIKATLVNFVVKYVKKLVPKYHL
PGAISFRQVLEVGATLNYQRPTVSNDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQTRA
TYGKVLRDGKEFVVTALPLYHIFALTVNGLLFLELGGQNLLITNPRDIPGFVKELGKVPF
TAITGVNTLFNALLNDEQFNKLDFSTLRLSAGGGMAVQKVVAERWEKLTGHYLLEGYGLT
ECSPLVSVNPYDISCHTGSIGLPVPSTDVRILDDAGNEVVPGEPGELCISGPQVMLGYWQ
HPEATAEVLKNGWLHSGDIVTVDQEGFIRIVDRKKDMILVSGFNVYPNEIEDVLMQHPKV
REAAAIGVPSDLSGEAVKVCIVKKEASLTKEEVLDHCRRQLTGYKVPKIIEFRDELPKTN
VGKILRRELRDEAKPGAN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaggtttggctgaaacgctacccggcagatgtacctgccgaaataagtgcagat
cgttacacctcgctggtggatctttttgagcaggcagtaaaacgctacgccgatcaaccc
gcatttctgaacatgggtcagaagatgagttatcgtcagctggaagagaagagccgtgcc
tttgctgcttatctccagcatcagctgggcctgaaagcaggtgatcgggtggcgctgatg
atgcctaacttactgcagtatccggtggccctgtttggtgtactgcttgccggtatggtc
gtggtcaatgtgaatccgctctacacgccgcgtgagctgaagcatcagctcaatgacagt
ggtgccagcgccatcgttattgtctcaaattttgcgcataccctggaaaaagtggtggct
gaaaccgctgtgcggcatgtcatcctgacccggatgggcgatcagctggcaccgataaaa
gccacactggttaattttgtcgtcaagtatgtgaagaagctggtgcccaaataccattta
cccggcgccatttcgtttcgtcaggtgctggaagtgggtgccacgctcaattatcagcga
ccgactgtctcgaatgacgatcttgccttcctgcaatacaccggcggcaccaccggcgtg
gcgaaaggggcaatgctaacccatcgcaacatgcaggcgaatctggagcagacccgtgcg
acatacggtaaggtactgcgtgacggaaaagaatttgttgtcaccgcgctgccgctttac
cacatcttcgctttaaccgtgaatggcctgctgttcctggagctgggcggtcagaatctg
ttaatcactaatccccgcgatattcccggcttcgttaaagagctgggtaaagttccgttt
accgcgattaccggcgtgaacacgctgtttaatgcgctgctgaacgatgagcagttcaat
aaactcgatttttcaacgctgcgcctctctgcgggtggcggaatggcagtgcagaaagtg
gtggctgagcgctgggaaaagctcaccggacactatctgctggaaggctacggcctgacc
gaatgttcgccgctggtatccgtcaatccgtatgacatcagctgccatacgggcagtatc
ggcctgccggttccttcgaccgacgtacgcattctcgatgatgccggaaacgaagtagtg
ccgggggagccgggcgaactctgtatcagtggtccgcaggtgatgctgggctattggcag
catccggaagcaacagcggaagtgctgaaaaatggctggctccacagcggtgatattgtt
accgttgaccaggaagggttcattcgcatcgttgaccgcaaaaaagatatgattctggtc
tccggttttaatgtctatccgaatgagatcgaagatgtactgatgcagcacccgaaagtg
cgtgaagccgcggcaattggcgtgcccagcgacctgtcaggcgaagcagtaaaagtctgc
atcgtgaaaaaagaggcgtcgctgaccaaagaagaggtgctcgatcactgtcgccgccag
ctgaccggttacaaggtgccaaaaatcattgagtttcgtgatgagttaccgaaaaccaac
gtcggaaagatcctgcgacgtgagctgcgcgacgaggccaagcccggcgcgaactga
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