Pantoea alfalfae: K6R05_09595
Help
Entry
K6R05_09595 CDS
T09440
Symbol
fimD
Name
(GenBank) outer membrane usher protein FimD
KO
K07354
outer membrane usher protein
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
palf02035
]
K6R05_09595 (fimD)
Bacterial motility proteins [BR:
palf02035
]
Pilus system
Fimbrial proteins
K6R05_09595 (fimD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
QZX94059
LinkDB
All DBs
Position
complement(2067435..2070047)
Genome browser
AA seq
870 aa
AA seq
DB search
MPSFRYSALALFVALSGSAQAQDWFNPAFLTKDGNEVADLSRFENGSGQLPGVYRVDIWR
NDEFVTTSPMRFVAVASQPQVSPASEAVKQDGTGLQPCVTVAWMKRLGVHTENLTALKAT
DNQDQCIDLAKSFPGAASYYDFASQRLMLTFPQAALRNSAQGYIPPEEWDEGINAALLNY
TLTGSKGDRNNSYYLNLTSGLNIGAWRLRNNGAWNHSDYADGYHQSQWQNISTFAERTII
PFKSELVLGDSSSSGDIYDSLGFRGVRLYSSDAMYPNSQQGYAPVIRGIASGRSQITVRQ
NGYVIYQNIVQSGAFEITDLNATSSSGDLDVTIKNDAGAVQKFVVPYSTVPLLQREGRTK
YDLVAGRYRSGLAGKEDPLFAQGTLARGLSNGTTLYGGSQIARNYLSVLTGLGRNLGDWG
AVSVDITAARSELADGSTHNGQSVRFLYAKSLNHTGTTFQLLGYRYSTRGFYTLGETAWE
AMNGYQNEWKDRGDGRGPQLEPVSYHNLMNSKKGRFQLSVAQQISDWGSLSLTATHQDYW
NSSGSDEWYQAGFSSGWHGINYNLSYALSRSKGMPQTDRLISLNISIPFGRWLGHDMAEH
EALNSMYATAQANRDQDGVTQMQTGVTGTLLQGNNLSYSIMQGHSNRNGDSGNMNVSWDG
SDARASGGYSYSNGNHAMNWDVSGGIIAHANGITFSEPLGDTNVLIKAPGAKGVHVENET
GISTDWRGYAVMPYASVYRSNRVALDVKSLDMHTDLDDTVREVVPTEGAIVRAEYTAHVG
LRAIFSLMHNGRPVPFGASVTDKITGATSIVGDTGDVYMTGIKPKGTLSVIWGSGSSDSC
MIPYELPAESEKLPVARMTLNCIAMVKNNK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgccctcttttcggtattcagctcttgccctgtttgtcgcgctatccggttcggctcag
gctcaggactggtttaacccggcctttctgacgaaagatggcaatgaagttgccgatctc
tctcgcttcgaaaacggttcaggacaacttcccggcgtttatcgtgttgatatctggcgc
aacgatgagtttgtgaccaccagtccgatgcgctttgttgccgttgcttctcagcctcag
gtcagccctgcatctgaagcggtgaaacaggacgggacaggattgcaaccctgcgtgact
gtagcatggatgaaacggctgggcgttcatactgaaaatctgacggcgttaaaggcgacg
gataatcaggatcagtgcatcgatctcgcgaaaagctttccgggtgccgcctcatattat
gattttgcctcccagcgcctgatgctgacctttcctcaggctgcgctgagaaacagtgcg
caaggctatattccgccagaggagtgggacgaaggtatcaatgcggcgctgctgaattac
acgctcaccggcagtaaaggtgacagaaacaatagctattatctgaaccttaccagtggt
ctgaatatcggagcatggcggctcagaaataacggtgcctggaaccactccgattatgct
gatggctatcatcaaagccagtggcagaatatctccacctttgcggaacgcaccatcatt
ccgtttaaaagtgaactggttctgggagacagcagcagctcaggtgatatctacgatagc
ctgggatttcgcggcgtacggctctactcctcagatgcgatgtacccaaacagtcaacag
ggctatgcgccggtgattcgtggcattgcatcagggcgctcgcagattacggtgcggcaa
aatggttatgtgatttaccagaatattgtgcagtccggtgcatttgaaattacggatttg
aatgccacatcatccagcggtgacctggacgttacgattaaaaacgatgccggtgcagtg
caaaaatttgttgtgccatattctaccgtgccgctgctgcagcgcgaggggcgaacaaaa
tatgatctggttgcaggtcgttatcggagcggtctggcaggtaaggaggatcctttattt
gctcagggcacgcttgccagaggtctcagcaatggcacaacgctgtatggcgggagccag
attgccagaaattacctctcggttctcacggggctgggacgcaatctcggtgactggggt
gcagtctctgttgatatcaccgctgcccgcagtgaactggcggatggcagtacgcataat
ggccagtctgtccggtttctttatgctaaatcgctgaatcataccggcaccacatttcaa
ctgctgggttatcgctactcaacgcgcggcttctacacgctgggtgaaaccgcatgggaa
gcgatgaacggatatcagaatgaatggaaagataggggggacgggcgcggtccgcagctt
gaacccgtcagttaccacaatcttatgaacagcaaaaaagggcgctttcagctgagcgtt
gcccagcagatcagcgactggggctcgctaagtctaaccgccacacatcaggactactgg
aatagcagcggcagcgatgaatggtatcaggctggtttctccagcggctggcacggcatt
aattacaatctctcctatgcgctcagccgcagcaaggggatgccgcaaaccgaccggctt
atctcgctgaacatctcgattccattcggacgctggctgggccatgacatggccgagcat
gaagcactcaacagtatgtatgcgacggcccaggctaaccgcgatcaggatggggttacc
cagatgcagacgggggtgaccggcacattgctgcagggcaataacctcagctatagcatc
atgcagggacacagtaaccgaaatggcgacagcggtaatatgaacgtcagctgggacggg
tcagatgccagagcgagcgggggttacagttacagtaatggcaaccacgcgatgaactgg
gacgtttcaggcgggatcatcgcccatgccaacggcatcacgttcagtgagccacttggg
gataccaatgtcctgatcaaagcgccgggtgctaaaggtgtgcatgtcgagaatgaaacc
ggcatcagtactgactggcggggctatgcggtcatgccgtatgcctcggtttatcgcagt
aaccgggtcgcgctggatgtaaaaagcctggatatgcacaccgatcttgacgataccgtc
cgcgaagtggtgccaacggaaggcgcgatcgtgcgggcggagtacactgcccatgtcgga
ttacgcgcaattttcagtctgatgcacaacggtcgtcccgttccctttggggcttcagtg
accgataaaatcaccggtgcgaccagtattgttggtgacactggcgacgtctatatgaca
gggattaaacctaaaggcacgctttctgtgatatggggaagcggctcgtcggatagttgc
atgattccttatgagctgcctgcagaaagtgaaaaattacctgtcgcgcgtatgacactt
aactgtattgctatggtgaaaaataataaatga
DBGET
integrated database retrieval system
