Pantoea alfalfae: K6R05_09750
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Entry
K6R05_09750 CDS
T09440
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
palf
Pantoea alfalfae
Pathway
palf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6R05_09750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_09750
Transporters [BR:
palf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K6R05_09750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IDEAL
Motif
Other DBs
NCBI-ProteinID:
QZX94089
LinkDB
All DBs
Position
2103427..2105058
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AA seq
543 aa
AA seq
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MTLTQRCGAWLITLLVLTGSASIQAKTPDDQLIVGMNMNNLLTLDPAAMTGNEVVGIVVN
LYDGLVELNPQQLTEVRPALAERWSVSPDNRTLTFHLRDNVRFHSGNPLTSADAVWSMRR
VLHLNLAQASVWKSYGFSRDNVDQMVTAPDDRTLVITLPKPNDPQLVIYSLAALGSMVVL
DRKTVQQHEVDGDWGNRWLTTHEAGSGPFRLDVWQAKDVLRMSRATDYWRGEAKMSRVVF
RHLQESQTLRLMMQKGDLDIASNMAIPDVRALRHDPDLTINAVRKGTIYYLAMSMKDPHF
DNNNVREAVRYLVDYQGINKSLMTGYGELHQRPIQAGMPATLPDPGYRLDVPRARALLAE
AGYPDGFDTTLRVLADQPFLNIAIAIQSTLLQGGIRAKIITGTGNQIYGAMRDRQFSLLV
GRGGSGVEPHPHSSLRALVYNPNNADSARLTNFQGWRTGFYDAQLNRMIDQALVERDKTR
QQQAYFAIQQRYDQLVPALMPISQMLDSVVVSNRVQAYQPHPSATTFLRDVWKTPEALAG
GTP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgacacaacgatgtggcgcgtggctgatcacgctgctggtgctcacgggcagc
gcgtcaatccaggcaaagaccccggatgaccagctgatcgtcggcatgaacatgaacaac
ctgcttaccctggatccggccgcgatgaccggcaacgaggtggtcggtattgtggtgaat
ctttatgacggcctggtggagctgaatccgcagcagctcaccgaagtacgcccggcgctg
gcggaacgctggtcagtcagcccggataaccgcaccctgacctttcacctgcgcgacaac
gtcaggtttcactccggcaatccgctcaccagcgccgatgcggtctggtctatgcgtcgc
gtgctgcatctgaatctggcgcaggcgtcggtgtggaagtcctacggtttcagccgcgac
aatgtggaccagatggtcaccgcccccgacgaccgcacgctggtgatcaccctgcctaaa
cccaacgatccgcagctggtgatctactcgctggcggcgctgggcagcatggtggtgctg
gaccgcaaaacggtgcagcagcatgaagtcgatggcgactggggcaaccgctggctcacc
acgcatgaagcgggttccggtccgttccggctggatgtctggcaggcaaaagatgtgctg
cgcatgagtcgcgcgacagactactggcgcggtgaggcgaagatgtcgcgggtggtgttc
cgtcacctgcaggaatcgcagaccctgcggctgatgatgcagaaaggcgatcttgatatc
gccagcaacatggcgatccccgacgtgcgcgccctgcgtcacgatcccgacctcactatt
aatgccgtcagaaaagggacaatctactacctggcgatgagcatgaaagatccgcacttc
gacaataacaacgtgcgtgaggcggtccgctacctggtcgattaccagggcattaacaaa
agtctgatgaccggctacggcgaactgcatcagcgcccgattcaggcggggatgcccgcc
acgctgcccgatcccggttaccggcttgatgtgccgcgcgcccgtgcgctgctggctgaa
gccggctatccggacggcttcgacactacgctgcgggtgctggccgatcagccgttcctg
aatatcgccatcgccattcagtcaacgctgctgcagggcggcatccgggcaaaaatcatt
accggcaccggcaaccagatttatggcgcgatgcgcgatcgccagttcagcctgctggtc
ggacgcggtggcagcggcgtcgagccgcacccccactccagcctgcgcgcgctggtctac
aacccgaacaatgccgacagcgcccggctgaccaacttccagggctggcgaaccggtttc
tacgacgcgcagctcaaccgcatgatcgatcaggcgctggtggaacgcgacaaaacccgc
cagcagcaggcctatttcgctatccagcaacgctatgaccagctggtgcctgcgctgatg
ccgatttcacaaatgctcgactccgtggtggtcagtaaccgtgtgcaggcgtatcagccg
catccttctgcaacgaccttcctgcgcgacgtctggaaaacgcctgaagccctggcggga
ggcacaccatga
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