KEGG   Pantoea alfalfae: K6R05_11140
Entry
K6R05_11140       CDS       T09440                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
palf  Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:palf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palf02044]
    K6R05_11140 (tssC)
Secretion system [BR:palf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K6R05_11140 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QZX94337
LinkDB
Position
complement(2396757..2398256)
AA seq 499 aa
MTQTSQQPQSQGAASFSQDEFSALLNKEFRPKSDQARAAVESAVKTLAQQALENTVTVSS
DAYRTIQALIAEIDEKLSQQVNQIIHHPEFQSLESAWRGLSYLVNNTETDEMLKIRFMSI
SKQELGRTLKRYKGAGWDQSPLFKKIYEQEYGQFGGEPFGCLVGDYYFDHSPQDVELLGE
MARIGSAAHCPFITGTAPEVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLG
LVMPRFLARLPYGIRTNPVDSFDFEEQTDGSDHGNYTWSNAAYAMAANINRSFKEYGWCT
AIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDF
AAFIGAQSLQKPTEYHDADATANARLAARLPYLFACCRFAHYLKCIVRDKIGSFRERDEM
ERWLNDWVMNYVDGDPANSSQETKSRKPLAAAEVNVEEQEDNPGYYAAKFFLRPHYQLEG
LTVSLRLVSKLPSLKNDNA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacgcagacttcacaacaaccccagtcgcagggcgcggccagtttcagccaggatgag
ttcagcgcgctgctgaacaaagagttccggccgaaaagcgaccaggcacgcgccgccgtc
gaaagcgcggtgaaaaccctggcgcagcaggcgctggagaacaccgtcaccgtctccagc
gacgcctatcgcaccattcaggcgctgatcgcggagatcgacgaaaagctgtcacagcag
gtgaaccagattattcaccatccggagtttcagtcgctggaaagcgcctggcgcggcctg
agctatctggtgaacaacaccgaaacggacgagatgctgaaaatccgctttatgagcatc
tccaagcaggagctgggtcgtaccctcaagcgctataaaggtgctggctgggatcaaagc
ccgctgttcaagaagatctatgagcaggagtatgggcagttcggtggtgagccgtttggc
tgtctggtcggcgactactatttcgaccacagcccgcaggatgttgagctgctgggtgag
atggcgcgcatcggttcggccgcccactgtccgtttatcaccggcaccgcgccggaagtg
atgcagatggaatcctggcaggagctggcgaatccgcgcgatctgaccaagatcttccag
aacaccgaatatgccgcctggcgcagcctgcgtgagtcggaagatgcacgctatctgggc
ctggtgatgccgcgcttcctggcgcgtctgccttatggtattcgcactaacccggtcgac
agcttcgatttcgaagagcagaccgacggttccgatcacggcaactacacctggagcaat
gccgcctacgccatggccgccaacatcaaccgctcctttaaagagtatggctggtgcacg
gccattcgcggcgtggagtcgggcggggcagtggaaaatctgccgtgtcacaccttcccg
agcgacgacggcggcgtggatatgaaatgtccgaccgaaatcgccatcagcgatcgtcga
gaagccgagctggcgaaaaatggctttatgccgctggtgcatcgcaaaaactctgacttc
gctgcctttattggcgcgcagtcactgcagaagccgacggaatatcacgatgccgatgcc
accgccaatgcccgtctggccgcgcgtctgccttatctgttcgcctgctgccgcttcgcg
cattacctgaagtgcatcgtgcgtgacaagatcggctccttccgtgagcgtgatgaaatg
gaacgctggctgaacgactgggtgatgaactacgtcgatggcgatccggctaactcctcg
caggagaccaagtcacgcaagccgctggcggctgccgaggtgaatgtggaagagcaggaa
gataacccaggctattacgccgcgaagttcttcctgcgtccgcactatcagctggaaggg
ctgaccgtttcgctgcgtctggtctctaagctgccgtcactgaaaaatgataatgcgtaa

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