KEGG   Pantoea alfalfae: K6R05_11160
Entry
K6R05_11160       CDS       T09440                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
palf  Pantoea alfalfae
Pathway
palf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K6R05_11160 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palf02044]
    K6R05_11160 (tssM)
Secretion system [BR:palf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K6R05_11160 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Xpo1
Other DBs
NCBI-ProteinID: QZX94340
LinkDB
Position
complement(2400630..2404259)
AA seq 1209 aa
MLNILFAVLTSRLAWGFVGITALSFIIWVIGPVFSIVDSRPLEPEQNRMISIALLYLVWG
LGQAIPRLYNYWLNRKLMSSLETGKSDAPEADRQRLTSEEQVLAGRFSEATEMLRKAHFQ
RHSSKGTPFWAQRFGRQYLYQLPWYMIIGAPGAGKTTALVNSGLQFPLADKFGKSALRGI
GGTRNCDWWFTNDAVLLDTAGRYSTQESQQERDASEWHHFLDLLRKYRGRQPINGVIVTL
SVSDLLSQSPEALRNQALALRQRLMELHDRLGIRFPVYVLVTKADLLKGFRSYFASLDKA
QREQIWGFTFPWAKASAADFELNSQFQQEYSLLQQRLDAGLADRLLTESDAQARAESYLF
PQEFAALRPLLADALDTLFARSDFETQFAPRGIYFASGTQEGLPFDRVMGELNRALNLPG
QQAGESGSWDRVDKDAPIPQNKGQSFFLKGVLENVIFQESGLAGSNRWWELRNRAGLWSG
YLALLLLLLVAGGLWLTSYSKNKAYLQEMAAKAPQVEQLGDQLQKQVNGDLFALVPYLNT
LLHLPESADFSLESPPLTRRMGLYRGTEVSDATRALYDKALKQLLLPQVAQNITRWLRND
NGSDADYSYEALKAYQMLYQPKHYDGKFLQAWLMLNLSRELPQNVTQQQVKQLAWHLQQL
LETQIHSSPYAKDDALVKREQALINQMPLSQRVYGRLKRLLQRDDSLQPVTLAALGGPQS
ELVFSRKSGKSVNDGVAGLYTPDGYWQHVDKQIGPVTQALYQDDLWVLDGAAPQQKSEQT
DLAVRQLYVQDYIRQWEQFLSDIQLNSSADLAQRINTARLLSGNHSPLRQLVINLSNLLT
LNRAQPDEKTAQAAKPSDNSATRTLEALFTSPEAAAARGQAAAQASPEQAVAVHFAPVLE
LAQPLQQGSKVLAVDDFLHQIDDLYRYLTAVQDAANSGMPPPASDAISRLQASAGRLPGS
LQNMVSSMAVGASSDAQRRDMDNVRKRITMEVGSFCRQAIAGRYPLVRSARSEVTPDDLA
RMFAPGSGMMDSFFRDNLASKVDTTNASWRFTPGIDGKTLPGGEALLRPFQQAQSIRDAF
FANGATTPGFRVTLRTVKMDNDILNLTLDVDGQQLRYSHGPQAVQMVSWPGPGGTSQVRM
QLGLTNGTTSTLVTSGPWALNRFFDRARVTAAGGLTREATFSVEGHQVTLSFTPGSIRNP
FQLPGFSCP
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgctgaatattctgtttgcggtgctgaccagccgccttgcgtggggctttgtcggcatc
accgcgctctcatttattatctgggtgattggcccggtcttctctatcgttgattcgcgg
ccgcttgagccagagcagaaccgcatgatcagtatcgcgctgctctatctggtctggggc
ctggggcaggcgatcccgcggctctacaactactggcttaaccgcaagctgatgtcgagt
cttgaaaccggcaaaagcgatgcaccggaagccgatcgtcagcgtctgaccagtgaagag
caggtgctggcagggcgtttttccgaagcgactgagatgctgagaaaggcgcacttccag
cgccacagcagcaaaggcacgccgttctgggcgcagcgctttggccgtcagtatctctat
cagctgccgtggtacatgattatcggcgcacctggtgccggtaaaacgacggcgctggtc
aactcgggcctgcagtttccgctggcggataagtttggcaagtcagcgctgcgcggcatt
ggcggtacccgcaactgcgactggtggttcaccaacgacgcggtgctgctcgataccgcc
gggcgctacagcacccaggagagtcagcaggagcgggatgccagcgaatggcaccatttc
ctcgacctgctgcgtaaatatcgcggacgtcagccgatcaacggcgtcatcgtcaccctg
agcgtttccgatctgctgagtcagtcacctgaggcgctgcgcaaccaggcgctggcgctg
cgtcagcgcctgatggagctgcacgatcgtctcggcatccgtttcccggtctatgtgctg
gtcaccaaagcggacctgctcaaaggcttccgcagctacttcgcctcgctggacaaagcg
cagcgtgaacagatctggggattcaccttcccgtgggcgaaagcgtccgccgccgatttc
gagctgaacagccagttccagcaggagtattccctgctgcaacagcggctcgatgccgga
ctggccgatcggctgctgacggagagcgacgcgcaggcgcgggcagaaagttatctcttc
ccgcaggagttcgctgcgctgcgtccgttgctggccgacgcgctcgacacgttgttcgcc
cgctccgattttgaaacccagttcgcgccacgcggcatctactttgccagcggcacccag
gaaggtctgccgtttgatcgggtaatgggtgaactgaaccgtgccctgaatctgcctggc
cagcaggcgggcgaatcgggcagctgggatcgggtcgataaggacgccccgattccgcag
aacaaagggcagagcttcttcctgaaaggcgtgctggagaatgtgattttccaggagtca
ggtctggcaggcagcaaccgctggtgggagctgcgcaaccgcgccggactctggtcaggc
tatctggcgctgctattgctgttactggtcgcgggcggtctgtggctcaccagctacagc
aagaacaaagcctatctgcaggagatggccgctaaagcgccgcaggtggagcaactcggc
gaccagcttcagaagcaggtcaacggcgatctctttgcgctggtgccttatctcaacacc
ctgttacacctgccggaaagcgccgacttctcgctggaatcgccgccgctgacgcgccgt
atgggcctttatcgtggtaccgaggtcagcgatgcgacgcgtgcgctctacgataaagcg
ctgaagcagctgctgttgccgcaggtggcgcagaacatcacccgctggctgcgcaatgac
aatggcagtgacgctgactacagctatgaagcgttgaaggcatatcagatgctctaccag
ccgaagcactacgacggcaagtttttgcaggcgtggctgatgcttaacctgtcgcgcgag
ctgccgcagaacgtgacgcagcagcaggtaaaacagctggcgtggcatctgcaacagctg
ctggagacgcagattcactcgtcgccgtatgcgaaggatgacgcgctggtaaagcgcgag
caggcgctgattaatcagatgccgctgtcacagcgcgtctacggacggctgaagcgcctg
ctgcaacgtgatgacagcctgcagccggtgacgctggcagcgctgggcggtccccagagc
gagctggttttttcccgtaaaagcggtaaatcggtgaatgatggcgtagcggggctctat
acgccggacggctactggcagcatgtggacaagcagattggtccggtgacgcaggcgctt
tatcaggacgatctctgggtgctggacggcgctgcgccgcagcagaaaagtgagcagacc
gatcttgcggtgcgccagctctatgtgcaggactacatccggcagtgggagcagttcctg
agcgatattcagctcaacagcagtgccgatcttgcgcaacgcatcaacactgcgcgcttg
ctgtcgggcaaccactcgccgctgcgccagctggtaatcaacctcagtaacctgctgacg
ctgaaccgggcgcagcccgatgagaaaaccgcgcaggcggcgaagccgtcggataacagc
gccacccgcacccttgaagcgctgtttacctcgcccgaagcggctgcggcgcgtgggcag
gcggcagcgcaggcgtcaccggagcaggcggttgcggtgcattttgcgccagtgcttgag
ctggcccagccgttacagcagggcagtaaggtgctggcggtggacgacttcctgcaccag
attgacgatctctatcgctacctcacggcggtgcaggatgccgccaacagcggaatgccg
ccaccggccagcgatgcgattagccgtttgcaggccagcgccggacggctgcccggttcg
ctgcagaatatggtctccagcatggcggtcggggccagcagcgatgcgcagcgccgcgac
atggataacgtccgtaaacgcatcaccatggaagtcggcagtttctgtcgtcaggcgatc
gccggacgttatccgctggtgcgctccgcgcgcagtgaggtgacacccgacgatctggcg
cggatgtttgctcccggcagcggcatgatggacagcttcttccgcgacaatctggccagc
aaagtggataccactaacgcctcatggcgctttacgccgggtattgacggcaaaacgctg
ccgggtggcgaagcacttctgcgtcctttccagcaggcgcagtcgattcgtgatgcgttc
tttgccaacggcgccaccacgccaggtttccgcgtcacgctgcgcaccgtaaaaatggac
aacgacattcttaacctgacgctggatgtggatggacagcaattgcgttacagccacggg
ccacaggcggtgcagatggtcagctggcccggtccgggcggcaccagccaggtgcggatg
cagctgggcctgaccaacggcactacctcaacgctggtcaccagtgggccctgggcactc
aatcgcttcttcgatcgcgcccgtgttacggcggccggcggcctgacccgcgaagccaca
ttcagcgtggaggggcatcaggtcacgctgtcgttcacccctggcagcattcgtaacccg
ttccagcttcccggctttagctgcccctga

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