Pantoea alfalfae: K6R05_12540
Help
Entry
K6R05_12540 CDS
T09440
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
palf
Pantoea alfalfae
Pathway
palf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6R05_12540 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_12540 (msbA)
Enzymes [BR:
palf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
K6R05_12540 (msbA)
Transporters [BR:
palf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K6R05_12540 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
DUF87
AAA_25
AAA_22
RsgA_GTPase
AAA_16
APS_kinase
nSTAND3
AAA_29
AAA_30
AAA_18
Ploopntkinase3
AAA_24
Activator-TraM
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QZX94590
LinkDB
All DBs
Position
complement(2662835..2664583)
Genome browser
AA seq
582 aa
AA seq
DB search
MHQDKDLSTWQTFRRLWPMIAPNKAGLIAASVALIINAAGDALMLSLLKPLLDDGFGKAD
RSVMLWLPLVVIGLMLVRGVTSYISSYCISWVSGNVVMNIRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSGALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSF
AIRTVSKRFRTISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQDIESERFSRVSNRMRQQ
GMKLVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGTREITRAKGDIEFRDVTFTYPGREIPALR
NINLSLPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILLDGHDLREYSLRSLRNQVA
LVSQNVHLFNDTIANNIAYARSEQYSREEIEQAATMAHAMDFINKMDKGLDTMIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVIEDGQIVERGTHQVLLAERGAYAQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagataaagatctctctacgtggcagacgtttcgccgactctggccgatgatc
gcgcctaataaagcgggattaattgcggcctcagtcgccctgattattaatgctgcgggc
gacgccttaatgctctcactgttgaaaccgttactggatgatggttttggtaaagctgac
agatcggtgatgctgtggctgccgttagtggttattggcctgatgctggtacgcggagtc
accagttatatctccagctactgcatctcctgggtctctggcaacgtcgtgatgaacatc
cgccgtcgtctgttcagccatatgatgggcatgccggtttcgtttttcgaccagcagtca
accggcaccctgttgtcacgcattacttacgattctgagcaggtcgcctcctcttcttcg
ggcgcgctggtcaccgtagtgcgtgaaggggcttccattattggcctgtttatcatgatg
ttctactacagctggcaactgtcgctgatcctgattgtactggcacctatcgtctccttt
gctatccgcaccgtctctaagcgcttccgcaccatcagcaaaagtatgcagaacactatg
gggcaggtgacaaccagcgccgagcagatgctgaaagggcacaaagaagtgctgattttt
ggcggacaggacattgaatcggagcgcttttcccgcgtcagtaaccggatgcgtcagcag
ggaatgaaactcgtttcagcctcctccatttccgatccgattattcagctgatcgcgtcg
ctggcactggcttttgtgctctatgctgccagcttccccagcgtcatggataccctgaca
gccggtaccatcaccgtggttttctcctcgatgattgccctgatgcgcccgcttaagtct
ctgaccaacgtcaacgcccagttccagcgtgggatggcggcctgtcagacactgttctct
attctggatagtgagcaggaagtggataacggtacgcgcgaaatcacccgtgctaaaggg
gatattgaattccgtgatgtgacctttacctaccctggtcgtgaaattccggccctgcgc
aatatcaatctgtcgctgccggcaggaaaaacggtggcgctggtgggccgttccggttcc
ggtaagtctacgatggcgagtctgctgacccgcttttatgacatccagcagggcgaaatc
ctgctggacggtcatgatctgcgtgagtacagcctgcgctcattgcgtaatcaggtggcg
ctggtgtcacagaatgtgcacctcttcaacgacacgattgccaataacatcgcgtatgcc
cgcagtgagcaatacagtcgtgaagagatcgagcaggcggccaccatggcgcatgccatg
gactttatcaataaaatggataagggtctggatacgatgattggcgagaatggcgtgctg
ttatctggcggtcagcgtcagcgtatcgccattgcccgtgcgttgctgcgtgattgtccg
attctgatcctggatgaagcgacctcggcgctggataccgagtcagaacgcgcgattcag
tctgcactggatgagttgcagaagaaccgtacctcgctggtaattgcgcaccgcctttct
accattgagaaagcggatgaaatcgtggtaattgaagatggccagattgttgaacgcgga
acgcatcaggtgctgttagcagaacgcggcgcctatgcacagctgcataaaatgcagttc
ggccaatga
DBGET
integrated database retrieval system
