Pantoea alfalfae: K6R05_13465
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Entry
K6R05_13465 CDS
T09440
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
palf
Pantoea alfalfae
Pathway
palf00020
Citrate cycle (TCA cycle)
palf00190
Oxidative phosphorylation
palf00650
Butanoate metabolism
palf00720
Other carbon fixation pathways
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01120
Microbial metabolism in diverse environments
palf01200
Carbon metabolism
Module
palf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
palf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
palf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
K6R05_13465 (sdhA)
00650 Butanoate metabolism
K6R05_13465 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
K6R05_13465 (sdhA)
00720 Other carbon fixation pathways
K6R05_13465 (sdhA)
Enzymes [BR:
palf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
K6R05_13465 (sdhA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
FAD_binding_3
Thi4
FAD_oxidored
BEX
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
QZX94766
LinkDB
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Position
complement(2867916..2869682)
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AA seq
588 aa
AA seq
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MSLPIREFDAVVIGAGGAGMRAALQISQAGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNAEGAVVGC
TAICIETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGILELSRTFAHADPVKEPIPVIPTCHYMMGGI
PTKVTGQALRVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLL
ESIQEQGELRDATEDEIAVAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFREGDAM
AQGLEELKEIRQRLKSARLDDRSPDFNTQRIECLELDNLMETAFATAVAANYRTESRGAH
SRFDFPDRDDENWLCHSLYVPETESMTRREVNMQPKLRAAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccaatcagagagtttgatgccgtggtgatcggcgcaggtggcgcaggtatg
cgggccgcactgcaaatctcccaggccggtcagagctgtgccctgttatctaaagttttc
ccgacccgttcccacactgtatctgcgcagggcggtattaccgttgcgctgggtaatacc
catgaagataactgggaatggcatatgtacgacaccgtcaaaggttccgactacatcggt
gaccaggacgcgattgaatatatgtgtaaaaccggcccggaagcaattctggaactggaa
cacatgggcctgccgttctcgcgtctggaagatggtcgtgtctatcagcgtccgtttggt
ggtcagtcgaagaacttcggcggcgagcaggcggcacgtaccgctgcagcagctgaccgt
accggccacgccctgttgcatactctttaccagcagaacctgaaaaacaaaaccaccatc
ttctctgagtggtatgcactggatctggtgaaaaacgccgagggcgcagtggtgggttgt
accgctatctgcatcgaaaccggcgaaaccgtctatttcaaagcaaaagcgaccattctg
gccaccggcggcgcgggccgtatctatcagtccaccaccaatgcacacatcaacaccggc
gacggcgtgggtatggcactgcgtgcgggcgtgccggtgcaggatatggagatgtggcag
ttccacccaaccggtattgctggtgcgggcgtgctggtcaccgagggctgccgtggtgaa
ggcggttatctgctgaacaaacatggcgaacgcttcatggagcgttatgcgccaaacgct
aaagatctggcgggccgcgacgtggttgcgcgctcaatgatgattgaaatccgtgaaggt
cgcggctgtgacggtccgtggggcccgcacatcaaactgaaactcgatcacctgggtaaa
gaggtgcttgagtcacgtctgcctggcatcctcgagctgtcacgcacctttgctcacgcc
gatccagtcaaagaacctatcccggtcattccgacctgccactacatgatgggcggtatt
ccgactaaagtgaccggtcaggcactgcgtgtgaatgagcagggtgaagatgtggtaatt
cctggcctgttcgctgtcggcgaaattgcctgcgtatcggtacacggtgccaaccgtctg
ggcggtaactcactgctcgacctggtggtctttggccgcgcagcgggtctgcatctgctg
gagagtattcaggagcagggcgaactgcgtgacgctacggaagatgagattgccgttgcg
atggcgcgcttcaaccgctgggaaaacaataccacgggtgaagacccggttgagattcgt
aaagcgctgcaacgctgcatgcagaataacttctctgtattccgcgaaggcgacgcgatg
gcgcagggtctggaagagctgaaagagattcgccagcgtctgaaatcagcgcgtctggat
gaccgctcaccggatttcaacacccagcgtattgagtgtctggaactggataacctgatg
gaaacggcctttgccacggcggtcgcggctaactaccgcaccgagagccgcggtgcgcac
agtcgcttcgacttcccggatcgtgatgatgaaaactggctgtgccacagtctttatgtc
ccggaaaccgaaagcatgacgcgccgtgaggtgaacatgcagccgaaactgcgcgcggcg
ttcccgccgaaagtgcgtacctactaa
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