Pantoea alfalfae: K6R05_13715
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Entry
K6R05_13715 CDS
T09440
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
palf
Pantoea alfalfae
Pathway
palf03030
DNA replication
palf03430
Mismatch repair
palf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6R05_13715 (holA)
03430 Mismatch repair
K6R05_13715 (holA)
03440 Homologous recombination
K6R05_13715 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palf03032
]
K6R05_13715 (holA)
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_13715 (holA)
Enzymes [BR:
palf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6R05_13715 (holA)
DNA replication proteins [BR:
palf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6R05_13715 (holA)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6R05_13715 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
IFT52_central
Motif
Other DBs
NCBI-ProteinID:
QZX94809
LinkDB
All DBs
Position
2914900..2915931
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLSAQLREGLRACYLLAGNEPLLLQESADAIRAAATAQQFEEHFSFTLDAQTD
WESLFVSCQSLSLFAQRQTMTLQFPENGPNAAMAEQLVKLSQLLHADILLICRMPKLTRA
QENSAWFKALSASAVFVPCQTPEQAQLPRWVANRAQALKLSVDDAAVQLLCYCYEGNLLA
LAQALERLSLQWPDGKLTLPRVEEAVSDAAHFTPFHWVDALLAGKSRRALHILHQLEKEE
SEVVILLRTLQRDLLTLLHLHRHQAQQPLRTLMDQQRIWQNRRALFTDALQRLDATRLQR
AIHLLSQIEITLKQDYGQPVWPQLQTLTLLLSSRAFPTSFAHV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatttatcctgagcaactcagcgcgcagctccgtgaggggctgcgcgcctgt
tatctgttagccggaaacgaaccgctgctgttgcaggagagtgcggatgccatccgtgcc
gccgcaaccgcgcagcaatttgaagaacattttagttttacgctggacgcccagaccgac
tgggagagcctgtttgtcagttgccagtcactgagtctgtttgcccagcgtcagacgatg
acgctgcaattccccgagaatggccccaatgccgcaatggccgagcagttggttaagctg
tcgcagctgctgcatgccgatattctgctgatctgccggatgccaaagctgacccgcgcg
caggaaaacagtgcatggtttaaagccctgtccgcctccgcagttttcgtgccctgccag
acgcccgaacaggcacaactgccacgctgggtcgcgaatcgggctcaggcgctgaaactc
tcggtcgatgacgcggccgtgcagctgttgtgttactgctatgaaggcaatctgctggcg
ctggcccaggcgctggagcgtctctcgctgcagtggcctgacggcaagctgaccctgccc
cgggttgaagaggcggtcagcgatgcggctcacttcacaccgttccactgggtcgatgct
ctgctggcgggtaagagccgtcgcgcgctgcacatcctgcatcagctggagaaagaagag
agcgaagtcgtgattctgctgcgtacgctacagcgcgatctgctgacgctgctgcatctg
catcgccatcaggcgcagcagccgttgcgtacgctgatggatcaacagcgtatctggcag
aaccgccgcgcgctgttcactgacgcactgcaacgcctggacgccacgcgtcttcaacgc
gcgattcatctgctcagtcagattgagatcaccctgaagcaggattatgggcagccggta
tggccgcagttacagaccctgacactgctgctcagcagtcgtgcttttccgacgagtttt
gcccatgtctga
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