Pantoea alfalfae: K6R05_13735
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Entry
K6R05_13735 CDS
T09440
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
palf
Pantoea alfalfae
Pathway
palf00550
Peptidoglycan biosynthesis
palf01100
Metabolic pathways
palf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K6R05_13735 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6R05_13735 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palf01011
]
K6R05_13735 (mrdA)
Enzymes [BR:
palf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K6R05_13735 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
palf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K6R05_13735 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QZX94813
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Position
2917487..2919391
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AA seq
634 aa
AA seq
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MKLQSNAFRDYSAEQKLFVRRAFIAFVGILLLSSILVVNLYHLQILRFDDYSTRSNQNRI
KLVPVAPSRGIIYDRTGTPLALNRTIYQAELVPEKVDNLQQTLENLRPVLELTDEDLENF
QKERKRSRRFTSIPVKTGLNEVQVARFAVNQYRFPGVEVKGYQRRYYPYGATLTHVVGYV
SKINDRDVARLDKEGIWPNYAATHDIGKLGIEAYYESLLHGKTGFEEVEVNNRGRVIRQL
HEESPQAGRDIYLTIDLKLQQYVETLLAGSRAAVVVSDPRTGEILAMVSTPSYDANLFVD
GISSKDYRGLLEDENRPLYNRAIQAAYPPASTVKPYVAVSALSAGVINRNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSEWMNKFGYGSRTGI
DLPQESAGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKAMMILINDGVVK
VPHMLRATREGRTLVPYRQPPGAPIGDIHSGYWEIAKDGMYGVANRPNGTAHKSFADAPY
KIAAKSGTAQVFGLKENETYNAHRIAERLRDHKLMTAFAPYDKPRVAVTIILENGGAGPA
VGTVMRQILDHIMLGDNNTVLPDAAPVPPGYEGE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaaagcaacgcctttcgcgattacagcgccgaacagaaactctttgtccgt
cgggcgttcatcgccttcgtcggtatcttactgctctcttcaatcctggtggttaaccta
taccacctgcagattcttcgcttcgatgattacagcacccgctccaatcagaaccgcatt
aaactggtgcctgtcgcacccagccgcggcattatttacgatcgcaccggcacgccgctc
gcactgaaccgcaccatctatcaggcagaactggtgccggagaaagtcgataacctgcag
cagacgctggaaaacttacgcccggtgcttgagctgacggacgaagacctggaaaacttc
cagaaagagcgaaaacgctcgcgtcgctttacctccattccggttaaaaccggtctgaat
gaagttcaggtggcacgctttgcggtcaatcagtaccgctttcccggcgtggaagttaaa
ggttatcagcgccgctactacccctacggtgccacgctaacgcatgtggtcggttacgtc
tcaaaaattaacgatcgtgacgttgcacgcctcgacaaagaaggcatatggcctaactac
gccgcgacgcacgatatcggcaagctgggcatcgaagcgtattacgaaagtctgctgcat
ggcaaaacgggctttgaagaggttgaggtcaacaaccgtggccgtgtcattcgccagctg
catgaggagtcacctcaggcaggccgtgatatctatctgactatcgatctcaaactgcag
cagtatgtcgagaccctgctggcgggcagtcgcgccgctgttgtcgtcagcgatccgcgc
accggcgaaattctcgccatggtctccacacccagttacgatgcaaacttatttgtcgac
ggtatttccagcaaggattatcgcggcctgctggaagatgaaaatcgccctctctataac
cgtgcaattcaggcggcttatccaccggcctcgacggttaaaccctatgtagcagtttct
gcgctgagtgctggcgtgattaaccgtaataccagcctgtttgatcctggctggtggcag
cttcccggttcagagaagcgcttccgcgactggaaaaagtggggtcatggtcgtcttaac
gtcaccaaagcgctggaggagtctgccgataccttcttctatcaggtcgcctacgacatg
ggtattgaccgcctgtcagaatggatgaataaatttggttacggcagccgtaccggcatt
gacttaccgcaggagagcgccggtaacatgccgacccgcgagtggaagcagaagcgcttt
aaaaagccgtggtatcagggtgacaccattccggtgggaatcggccagggttactggacg
gcgaccccgctgcagatgaacaaagcgatgatgattctgatcaacgatggcgtcgtcaag
gtgccacacatgctgcgcgccacccgcgaaggccgaactctggtgccctatcgccagccg
cctggggccccgattggtgatatccattccggctactgggaaatcgccaaagatggcatg
tacggcgtggcgaatcgccccaacggcaccgcgcacaaaagctttgctgatgccccttat
aaaatcgccgccaaatccggtacggcacaggtttttggcctgaaagagaacgaaacctat
aacgcccatagaattgctgaacgattgcgcgaccataaattaatgaccgcgtttgcccct
tatgacaaacctcgggtggctgtgaccatcattctggagaacggtggcgccggtccggct
gtcggcaccgtgatgcgccagattctggatcacattatgttgggtgataacaatacagtt
ctgccggacgccgcccctgtgccgcccggttatgaaggtgaataa
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