Pantoea alfalfae: K6R05_14520
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Entry
K6R05_14520 CDS
T09440
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_14520 (sbcD)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6R05_14520 (sbcD)
Archaeal homologous recombinant proteins
K6R05_14520 (sbcD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Fic_N
Motif
Other DBs
NCBI-ProteinID:
QZX94957
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Position
3070262..3071461
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AA seq
399 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIIAGDLFDTGTPPSYAR
EMFNRFVVALQPTGCQLIVLAGNHDSVATLNESRELLACLNTRVIATPQEQDDVLLLNTR
QGEPGALLCAIPYLRPRDILRSRAGQSGRDKQTSLLEAIAHHYQQRFAAAQALGYALPII
ATGHLTTVGVSQSDSVRDIYIGTLDAFPASAFPAADYIALGHIHRAQRVAGSEHIRYSGS
PIPLSFDELGSEKSVFLLELAVSGLQSVTPLVVPQAQPMQVLKGSLAQIAEQLNAFSTTE
QEKPTWLDIEVTTQEYLSDLQRQVETLTATLPVEVLLLRRSREQRQQSLARLDNETLSEL
KVEEVFARRLALDEALQPAQIDEMTTLFRQTLAAMEETR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatactgcggactggcatctggggcagttcttttacaacaaaagtcgg
gcagccgaacatcaggcgtttctcgactggctgttgatccagattgaacagcatcaggtg
gatgcgctgattattgcaggcgacctgtttgataccggcacgccgcccagctacgcccgc
gagatgtttaaccgttttgtggtggcgctgcagcccaccggctgtcagctgattgtgctg
gcgggtaaccacgattccgtggcaacgctgaacgagtcacgcgagctgctggcctgtctc
aatacccgggtgatcgctacaccgcaggagcaggatgatgtgctactgctcaacacccgc
cagggcgagccgggtgcgctactgtgcgccattccctatctgcgcccgcgcgatatcctg
cgcagccgggcgggtcagtcgggccgcgacaaacagacctcgctgctggaggcgattgcc
caccactatcagcagcgtttcgccgctgcccaggcgctgggctatgcgctgccaatcatt
gctaccggtcacctcaccactgtcggcgtcagccagagcgattcggtgcgcgacatctac
atcggcacgctggacgcgtttccggccagcgcgtttccggctgctgactatattgcgctc
ggccatattcatcgcgcccagcgcgtggccggcagcgagcatatccgctatagcggctcg
ccgattccgctgagctttgatgagctggggagtgaaaagagcgtcttcctgctggaactg
gcggtcagtggcctgcagtcagttacgccgctggtggtgccacaggcgcagccgatgcag
gtgctgaaaggttcgctggcgcagattgcggagcagctaaacgcctttagtacgacagag
caggaaaaaccgacctggctcgacatcgaagttaccacccaggagtacctcagcgatctg
cagcgccaggtcgaaacactgaccgctacgctgccggtcgaggtattgctgttacgccgc
agtcgtgaacagcgtcagcagagcctggcgcggctcgacaacgaaacgctgagtgagctg
aaggtggaagaggtcttcgcgcgccgcctggcgctggatgaggcgctgcaaccggcgcaa
attgacgagatgaccacgctgtttcgccagacgctggccgctatggaagagacccgatga
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