Pantoea alfalfae: K6R05_14525
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Entry
K6R05_14525 CDS
T09440
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_14525
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6R05_14525
Archaeal homologous recombinant proteins
K6R05_14525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
MobB
nSTAND3
AAA_21
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZX94958
LinkDB
All DBs
Position
3071458..3075132
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGAISQSQNALMTRDCAECLAEVEFEIKGEAWRAFWSQNRARGTADGKLQAPRVELARCD
DNLIVADKVGDKLKLIETLSGLDFERFTRSMMLSQGQFAAFLNAKASERAELLEELTGTE
IYGLISAAIYERHKEAKTQLDLLRSQAGAMALLDSDARDALQQQLTALTDAEQQLSAHYQ
LAQQQQQWQQQAQQLLQDSAQAEAALQQAQAVSQAAETDRQRLARSEPAEKLRIKLQQRD
ALRSEQQQAESRYQQLTSATALAQNQQQQHQQHYAAAQTARQQAQQEQQQQENLLTEQVL
PLDQRMSTLQQHLAEQQQENSRLQQHADQTQASLTQQMQQVAGWQQAITEQHQLREQLAD
LAHWGASLPVWQENFALLAQREATLAELTQQREQQQQQIDAQQAKQQQQAQQALPRQQAE
QQARQALLQAEQELTSLHEQHPPAALRQALSQLQNSRPARQQLLLLSTQWQPLHQQLDQH
QQKLSALVKAHQQSEAELQTLRETWKREKQQLDDVEKICALEQQIVDLSDYRARLTADQP
CPLCGSCTHPAVEAYSTLEVSANQQRRAALQQQTEALREAGTAKNEQLKQSTVQQQTLRE
EIAGMQQQLDQLEQQWQALSGELALTFPLADRESLATWQQQQSDRESQLEQQRQAQEAAE
QARQAAKDHHLQQLQAWQQHQQAGQLAQQSLTSLQQALDALQQRQQQEQQAWAQLQSRLE
QQFTAHSLALPDAAHRDAWLAEQQRRWQRWQESEQLLANLQPQLLKGETQLTALQQQAEQ
EQQQLTTRQQQQQQSQTQLSEMRRARLALFGDREVTLARQQMQTRVQHADEQLAQQLTAL
QQAHAEVSRLQGELSGLENQRQTLSGKLAEAESALQQALESAGFADEASLREALLDEQTA
LQLRQQLQQLDQQCQQQQARLADLHQRLSAHQQAKPDAMPESAEALAQQLEQLRLALRDN
ASQQGQIQQQLYSDASLRARQQSLMTQIEQDGVILAQWSLLNDLIGSASGDKFRRFAQGL
TLDHLVALANRQLDRLHGRYLLQRRAQDLLELDVVDTWQADAARDTRTLSGGESFLVSLA
LALALSDLVSHKTRIESLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVRKMNGLGYSQLELPQG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttacgctacggtttaaaaacctcaacgccctgcgcggtgaatggttcatc
gacttccgcgccgaaccctttgccagcaacggcctgtttgccataaccggggccaccggg
gccggtaaaaccaccctgctggacgcgatctgcctggcgctctatcaccagacgccgcgc
ctgggggcgatttcccagagccagaatgccctgatgacccgcgactgcgcagaatgtctg
gctgaggtcgagtttgagatcaaaggtgaagcctggcgcgccttctggagccagaaccgc
gcacgcggcaccgccgacggcaaactgcaggcaccgcgcgttgagctggcgcgctgtgac
gacaacctcattgttgccgataaagtcggtgacaagctgaagctgatcgaaaccctctca
ggtcttgatttcgaacgctttacccgctcgatgatgctgtcacagggccagtttgccgcc
ttcctcaatgctaaagccagtgaacgcgccgaactgctggaggagctaaccggcaccgaa
atttacggcctgatttccgctgccatctacgagcgccacaaagaggcgaaaactcagctg
gatctgctgcgcagccaggcgggggcgatggccctgctggatagcgacgcccgtgacgcc
ctgcaacagcagctcaccgctctgactgacgcggaacagcagctcagtgcacactatcaa
ctggcgcagcaacagcagcaatggcagcagcaggcacagcagttactgcaggacagtgcg
caggctgaagccgcgctgcagcaggctcaggccgtctcacaggcggcagagacggatcgc
cagcggctggctcgcagcgaaccggctgaaaagctgcggataaaactgcagcagcgcgac
gcgttgcgcagcgaacagcagcaggctgagagccgctatcagcagctcacgtcagcgacg
gcgctggcgcagaaccagcagcagcagcatcagcagcactacgcagccgctcagacggcc
cgccagcaggcgcagcaggaacagcagcagcaggaaaacctgctgacggaacaggtgctg
ccgctggatcagcggatgagtacgctgcagcagcaccttgcggagcagcagcaggagaac
agtcgtctgcagcagcatgccgatcagacccaggccagcctgacgcagcagatgcagcag
gtcgcgggctggcagcaggcgattacagaacagcatcagttacgcgagcagcttgccgat
ctggcgcactggggcgcttcgctgccggtatggcaggagaattttgctttgctggcacag
cgtgaggcgacgctggcggaactgacacaacagcgcgagcagcagcagcaacagattgat
gcgcaacaggcgaaacagcagcagcaggcacaacaggcactgccgcgccagcaggcggag
caacaggcccgccaggcgctgttgcaggcggagcaggaactcacttcgcttcatgaacag
catccaccggctgcactgcgccaggcattaagccagttgcagaacagtcgtccggcgcgt
cagcaactgctgctgctctcaacgcagtggcagccgctgcaccagcagctggaccagcac
cagcaaaagctgagcgcgctggtaaaagcgcatcagcagagtgaagcggaacttcagacc
ctgcgcgagacgtggaaacgcgaaaagcagcagctggatgacgtcgaaaaaatctgcgcg
ctggagcagcagattgtcgacctcagcgattaccgcgcccggctcaccgccgatcagccc
tgtccgctgtgcggctcctgcacccatcctgcggtcgaggcctacagcacactggaagta
agtgctaaccagcagcgccgggctgcgctgcaacaacaaaccgaggcactgcgcgaagcg
ggcacggcaaaaaacgaacagctgaagcaatcaacggtgcagcagcagactctgcgcgag
gaaatcgccgggatgcagcaacagcttgatcagcttgagcagcaatggcaggcgctgagc
ggtgagctggcacttaccttcccgcttgccgatcgcgagtccttagccacgtggcagcag
cagcaaagcgaccgtgaaagtcagcttgagcagcagcgacaggctcaggaggccgctgaa
caggcgcgtcaggctgcgaaagatcaccatcttcagcaattgcaggcctggcagcagcac
cagcaggccggacagctggcgcagcagtcgctgaccagcctgcaacaggcgctggatgcg
ctgcaacagcgtcagcagcaggaacagcaggcctgggcgcagttgcagagccgtctggag
cagcagttcactgcacacagtcttgccctgcccgatgccgcccatcgcgatgcgtggctg
gcggagcaacagcggcgctggcagcgctggcaggaaagtgagcagttgctcgctaacctg
cagccgcagctgttaaaaggggaaactcagctcactgccctgcagcagcaggctgaacag
gaacagcagcagctcacgacccgtcagcagcagcagcagcagagccagacgcagctcagc
gagatgcgccgtgcccgtctggcgctgttcggcgatcgcgaggttaccctcgcccgtcag
cagatgcagacccgcgttcagcacgctgatgaacagctggcacagcagctcaccgccctg
caacaggcgcacgccgaggtcagtcgcctgcagggtgagctgtcggggctggaaaatcag
cgtcagaccctcagcggcaaactggcagaggcggaaagcgcactgcagcaggcactggag
agcgccggatttgccgatgaagccagcctgcgcgaggcgctgctggatgagcagactgca
ctgcaactgcgccagcagctgcagcagctcgatcagcaatgccagcagcagcaggcgcga
ctggcggatctgcatcagcggctcagcgcgcatcagcaggcgaagcccgacgcgatgccg
gaatctgcggaagcgctggcgcagcagctggagcagttgcggctggccctgcgcgacaac
gccagccagcagggtcagattcagcagcagctgtacagcgacgccagtctccgcgcccga
cagcagagcctgatgacgcagattgaacaggatggtgtgatactggcgcagtggagcctg
ctcaacgatctgatcggctccgccagcggcgacaagttcaggcgcttcgcgcaagggtta
acgctggatcatctggtcgcgctcgctaatcgccagcttgatcggctacatggccgttat
ctgctgcagcgccgggcgcaggatctgctggagctggatgtcgtcgatacctggcaggcc
gatgcggcgcgcgatacccgcacgttatcaggtggcgagagcttcctggtcagtctggcg
ctggcactggcgttatcagatctggtcagccacaaaacgcgcatcgaatcgctgtttctg
gatgaggggttcggcacgctggatgcgcagacgctcgacaccgcgctggatgccctggac
gcgctgaacgccagcggcaaaaccattggggtgatcagccacgtggaagcgatgaaagag
cgcatcccggtgcagattaaagtgcgcaaaatgaatggcctgggttacagccagctggag
ctgccgcagggataa
DBGET
integrated database retrieval system