Pantoea alfalfae: K6R05_14700
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Entry
K6R05_14700 CDS
T09440
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palf03009
]
K6R05_14700 (dbpA)
Enzymes [BR:
palf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K6R05_14700 (dbpA)
Ribosome biogenesis [BR:
palf03009
]
Prokaryotic type
rRNA helicases
K6R05_14700 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QZX94990
LinkDB
All DBs
Position
3109404..3110786
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AA seq
460 aa
AA seq
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MTAFSTLNSLPDSQLDNLREMGYTSMTPVQAATLPAILQGRDVRAQAKTGSGKTAAFGIG
LLHHIDSTRFQTQALILCPTRELADQVGNVLRQLARFTRNIKVLTLCGGQPMSAQRDSLV
HPPHIVVGTPGRILDHINRENLKLDQLNTLVLDEADRMLEMGFLNDMETIIEATPASRQT
LLFSATWPDGITAISTRFQRDALSVVTEDVSELPSIDQQFFEASHNEKLGLLIALLGDRQ
PSSCVVFCNTKRECDDVAAALNARDISALPLHGDLEQRDRERVLIRFANGSGRVLVATDV
AARGLDIKSLAMVVNYQLAWDPEVHLHRIGRTARAGEHGVAVSLVAADEMARAHALEDFL
QQKLPWVSASTLKKGSSKPLPAAMMTLCIDGGRKAKIRPGDILGALTGEAGYRAEQIGKI
VLTPTHAYVAIEANQAKAALVKLKQGKIKGKTCRAILLKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctcaattcgcttcccgatagccagctcgataacctgcgcgag
atgggctacaccagcatgacgcccgtgcaggccgctacgctgcccgccattctgcaggga
cgcgacgtgcgcgcgcaggcgaaaaccggcagcggtaaaacggctgcctttggtattggt
ttactgcaccatatcgacagcacccgctttcagacgcaggcactgatcctctgtccgacc
cgtgaactggcggatcaggtaggcaatgtcctgcgccagctggcgcgcttcacccgcaac
atcaaagtcctcaccctgtgtggcggacagccgatgagcgcacagcgtgattcactggtg
catccaccgcatatcgtggttggcacgccgggtcgtatcctcgaccacatcaatcgtgag
aacctcaagctcgaccagctcaacacgctggtactggatgaggcggatcggatgctggag
atgggtttcctcaatgatatggaaaccatcattgaagcgacgcctgcctcgcgccagacg
ctgctcttctccgccacctggcccgacggcatcacagccatcagcacccgcttccagcgt
gatgcgctgagcgtcgtcactgaagatgtcagtgaactcccgtcaatcgaccagcagttc
tttgaagccagtcacaatgaaaaactgggtctgctcatcgcactgctcggcgatcgtcag
ccttcatcctgcgtggtcttctgcaacactaaacgtgaatgtgacgatgtcgccgcggcg
cttaacgcgcgtgatatcagtgctctgccactgcatggtgatcttgagcagcgcgatcgc
gaacgtgtgctgatccgcttcgcgaacggcagcggtcgcgtgctggtcgctaccgatgtc
gctgcgcgcggactcgacatcaaatcgctggcgatggtagtcaactatcagctcgcatgg
gatcctgaagtccatctccaccgcatcggtcgtacggcgcgggcaggcgaacatggcgtt
gccgtcagcctggtcgcggctgatgaaatggcgcgcgcgcacgcgctggaagattttctg
cagcagaagctgccgtgggtctcggccagcacgctaaaaaagggcagcagcaagccactg
cctgccgccatgatgacgctatgcattgatggtggccgtaaagccaagatacgtccggga
gatattctgggtgcactgaccggtgaagcaggttatcgcgctgagcagatcgggaaaatt
gttctgaccccgacccatgcctacgtagcgattgaggcaaatcaggctaaagcggcactg
gtgaaacttaagcagggcaaaatcaaaggtaaaacctgtcgggcgattctgctgaaagac
taa
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