Pantoea alfalfae: K6R05_14960
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Entry
K6R05_14960 CDS
T09440
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palf
Pantoea alfalfae
Pathway
palf03030
DNA replication
palf03430
Mismatch repair
palf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6R05_14960 (dnaQ)
03430 Mismatch repair
K6R05_14960 (dnaQ)
03440 Homologous recombination
K6R05_14960 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palf03032
]
K6R05_14960 (dnaQ)
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_14960 (dnaQ)
Enzymes [BR:
palf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6R05_14960 (dnaQ)
DNA replication proteins [BR:
palf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6R05_14960 (dnaQ)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6R05_14960 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
QZX95040
LinkDB
All DBs
Position
complement(3161420..3162151)
Genome browser
AA seq
243 aa
AA seq
DB search
MSTANNRQIVLDTETTGMNMIGVHYEGHRIIEIGAVEVINRRLTGNNFHMYLKPDRLVDP
EAFGVHGIADEFLADKPAFSEIADEFLDYIRGAELVIHNAPFDIGFMDYEFSKLNRGIEK
TETFCKITDSLALARRMFPGKRNSLDALCSRYEIDNTKRTLHGALLDAEILAEVFLTMTG
GQTSLSFLSESESARQAQGESIQRIVRPASALRVVTASEEEVVAHESRLDLVMKKGGSCL
WRG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcaaataaccgccagatcgttctcgatactgaaaccaccggcatgaatatg
atcggggtacattatgaggggcaccgcatcattgagattggtgcggtagaggtgattaac
cgtcgcctgaccggcaacaatttccatatgtatctcaagcccgatcggctggtcgatcct
gaagcttttggtgtacatgggattgcggatgagtttctggccgacaagcccgcgttcagc
gaaatcgccgatgagtttctcgactatattcgcggtgccgaattagtcatccataacgcg
ccgtttgatatcggctttatggattacgaattttcaaagctgaatcgcggcattgagaaa
accgaaaccttctgcaaaattaccgacagcctggcactggcgcgtcgaatgtttcccggc
aagcgtaacagccttgatgcgctctgctcacgttacgaaatagacaacaccaaacgaacc
ctgcacggcgcactgctcgatgccgagattctggcagaagtgttcctgaccatgaccggc
gggcagacctctctctcctttttatcggagagtgaaagcgcccgacaggctcagggagag
agcatccagcgcatcgtgcgtcccgcttctgcactgcgtgtggtcacggccagcgaagaa
gaggtggttgctcatgaatcccgtctggatctggtgatgaaaaaaggcggcagctgtctg
tggcgcggctga
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