Pantoea alfalfae: K6R05_15090
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Entry
K6R05_15090 CDS
T09440
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
palf
Pantoea alfalfae
Pathway
palf00310
Lysine degradation
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
K6R05_15090
Enzymes [BR:
palf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
K6R05_15090
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QZX95058
LinkDB
All DBs
Position
complement(3183415..3185565)
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AA seq
716 aa
AA seq
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MNILAIMGAHGVFYKDEPLRELDAALNLQGFQLLYPKNSDDLLKLIEHNPRISGVIFDWD
AHNSPELCGEINQLNEYLPLYAFINTHSQMDISINEMRMPLHFFEYALNAADDIALHIRQ
YTDDYLDHITPPLTKALFTYVKEGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKSD
ISISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTVL
IDRNCHKSLTHLLMMSDLVPIWLKPTRNALGILGGIPKHEFTRESITQKVATTDRATWPV
HAVITNSTYDGLLYNTQFIKETLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGDRIPGKVI
YETQSTHKLLAAFSQASMIHIKGDYDEQTFNEAYMMHTTTSPNYAIVSSIETAAAMLRGN
PGKRLINRSVERALHFRREIQRLREESDSWFFDIWQPEQIDEAQCWAIQPGDEEWHGFTQ
ADRDHMYLDPIKVTILTPGMSELGEMAEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFS
IGIDKTKAMSVLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQTLAQGIHQLIR
HHDLPRLMLQAFDVLPEMKMTPHQAFQQQVKGNIETVDLSELVGRVSANMILPYPPGVPL
VMPGEMITEKSRAVLDFLLMLCSIGRRYPGFETDIHGASLTEEGEYRVRVLKNDPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattctggcgatcatgggcgcgcacggcgtgttttataaagatgaaccgttacgc
gaactcgacgcggcgttaaatctgcaaggcttccagctgctttacccgaaaaacagtgat
gatctgctgaagctgattgaacacaatccgcgtatcagcggcgtcatcttcgactgggat
gcacacaacagtcctgaactgtgtggtgagattaatcagctcaacgaatacctgccgctg
tacgcctttattaatacccactcacagatggacatcagcatcaatgagatgcgcatgccg
ctgcacttttttgaatatgcgctgaatgccgccgacgatatcgcgctgcatatccggcag
tataccgatgactatctcgaccacattacgccgccgctgaccaaagcattgttcacctat
gtgaaagagggcaagtacaccttctgcacaccgggccatatggcgggcaccgcatttcag
aagagcccggtaggctgcctgttctacgatttcttcggggccaatacgctgaagtcggac
atctccatttcagtgaccgagctgggttcgctgctggatcacaccggcccgcaccttgaa
gcggaagagtacatcgcacgcacgtttggcgccgagcagagttatatggtgaccaatggc
acctcaacgtcgaacaaaattgtcggcatgtatgcggccccggcgggcagcaccgtattg
atcgatcgcaactgccacaagtctctgactcatctgctgatgatgagcgatctggtcccg
atctggctgaagccaacccgcaatgcgctggggattctcggcggtatcccgaagcacgag
ttcacccgtgagagcattacgcagaaggtcgcgaccaccgatcgcgctacctggccggtg
catgcggtgatcaccaactccacttacgatgggctgctctacaatacccagttcattaaa
gagacgctggatgtgccgtcaattcatttcgattcagcctgggtgccttacaccaatttc
catccgatttatgccggtaaaagcggcatgagtggcgatcgtattccgggcaaggtgata
tacgagacgcaatcgacccacaaactgctggcggcgttctcgcaggcctccatgattcac
attaaaggcgactacgacgaacagacgtttaacgaagcctacatgatgcacaccaccacc
tcgcccaattacgctattgtctcctcaattgaaactgccgccgccatgctgcgtggtaac
cccggtaagcggttaatcaatcgctcggtggaacgcgcgctgcacttccgtcgggaaatc
cagcgcctgcgcgaagagtctgacagctggttcttcgatatctggcagccggaacagatt
gatgaagcgcaatgctgggcgatccagcccggcgacgaagagtggcacggatttacgcag
gccgatcgtgaccacatgtacctcgatccgatcaaggtcaccattctgacgccaggtatg
agcgagctgggtgagatggcggaagaggggatcccggccgcgctggtagcgaagtttctc
gatgagcgcggcattgtagtggagaagaccggcccctataacctgctgttcctgttcagt
atcggcatcgacaaaaccaaagcgatgagcgtgctgcgcggtctgaccgagtttaaacgc
gcctacgatctcaatctgcgggtgaaaaatatgctgccggatctctacgctgaagatccc
gacttttatcgaaatatgcgtatccagacgctggcgcaggggatccatcagctgatccgc
catcacgatctgccgcgtctgatgctgcaggcatttgatgtgctgcccgaaatgaagatg
acgccgcatcaggcgtttcagcagcaggtgaagggcaatatcgaaacggtggatctcagt
gaactggtcgggcgggtgtcggccaacatgattctgccttatccgccaggcgttccactg
gtgatgccgggcgagatgattacggagaagagccgtgctgtgctcgacttcctgctaatg
ctgtgcagcattggccggcgttatccgggcttcgaaaccgatattcacggtgccagcctg
acggaagagggcgagtaccgcgttcgcgtgctaaaaaacgatcccgcgtaa
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