Pantoea alfalfae: K6R05_15755
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Entry
K6R05_15755 CDS
T09440
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
palf
Pantoea alfalfae
Pathway
palf00220
Arginine biosynthesis
palf00240
Pyrimidine metabolism
palf00250
Alanine, aspartate and glutamate metabolism
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01240
Biosynthesis of cofactors
Module
palf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K6R05_15755 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K6R05_15755 (carB)
00220 Arginine biosynthesis
K6R05_15755 (carB)
Enzymes [BR:
palf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K6R05_15755 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
QZX95182
LinkDB
All DBs
Position
complement(3341346..3344573)
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AA seq
1075 aa
AA seq
DB search
MPKRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERHGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVHLDDPEA
LTRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEDQVASEG
VNSLDATFLRTLKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATNT
AYMYSTYEEECEANPSPDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDSIDRAEDRERFQQAVDRLKLKQPANATVATLEQAVEKAAGLGYPLVVRPSYVL
GGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLNQEIQNVMRQQVEKLAFELNVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPPYYSVKEVVLPFNKF
QGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRALLSVREGDKKRIVDL
AAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLKNGEYSYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADPTEQVISVQEMHAQIKAM
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacctaaaatccatcctgattcttggtgccggtccgattgtgatc
ggccaggcctgcgaatttgactattccggtgcgcaggcgtgtaaagcgctgcgtgaagag
ggttaccgcgtcattctggtaaactcgaacccggcgacgatcatgaccgacccggaaatg
gccgatgcgacctacattgagccgattcactgggaagtggtgcgcaaaatcatcgaaaaa
gagcgcccggatgcggtattgccaacgatgggcggacagacagcgctgaactgtgcgctg
gagctggagcgtcatggcgtgctggaagagtttggcgtcacgatgattggcgcgacggct
gatgcgatcgacaaagcggaagatcgtcgtcgcttcgacgtggcgatgaaaagcatcggt
ctggataccgcgcgttccggcattgcgcacaccatggaagaagcgctggccgtggcagaa
gatgttggcttcccgtgcattatccgtccctcatttactatgggcggaaccggtggcggc
atcgcctacaaccgcgaagagtttgaagagatttgcgaacgcggtctcgacctctcacca
accaatgagctgctgattgatgagtcgctgattggctggaaagagtatgagatggaagta
gtgcgcgataaaaacgacaactgcatcatcgtctgctcaattgaaaacttcgatgcgatg
gggatccacaccggtgactccatcacggtggcacctgcccagacgctgaccgacaaagag
tatcagatcatgcgtaacgcctcgctggcggtactgcgtgaaatcggtgttgagaccggt
ggctccaacgtgcagttctcggttaacccgaaagatggccgcctgattgtcattgagatg
aacccacgcgtgtcgcgctcttcggcgctggcgtcaaaagcgactggcttcccgattgct
aaagtggcggccaaactggcagtcggctacaccctcgacgagctgatgaacgatatcact
ggcggtttaacaccagcctcgtttgaaccgtcaatcgactacgtcgtcaccaagatcccg
cgtttcaactttgagaaatttgccggtgccaacgatcgcctgaccacgcagatgaaatcg
gtgggtgaagtgatggcgattggccgtactttccaggagtccatgcagaaagcgctgcgc
ggcctggaagtcggcgctaacggttttgacccgaaagtgcaccttgatgacccggaagcg
ttaacccgcatccgccgcgagctgaaagatgccggttcagaccgcatctggtacatcgct
gatgcattccgtgccggtatgtcagtagatggcgtgttcaatctgaccaacattgaccgc
tggttcctggtgcagattgaagagctggtacggctggaagatcaggtggcaagcgaaggg
gtgaatagcctggatgccacgttcctgcgtactctgaagcgtaaaggctttgccgatgcg
cggctggcgacgctggcaggtgtggctgagagcgaaatccgcaagctgcgtcagcagttt
aacctgcatccggtttataagcgggtggatacctgtgccgccgagttcgcgacgaatacg
gcctatatgtactccacctatgaggaggagtgcgaagccaacccgagtccggatcgtgaa
aaaatcatgattctggggggggggccaaaccgtatcggtcagggtatcgaattcgactac
tgctgcgttcatgccgctctggcgctgcgtgaagatggttaccagaccattatggtgaac
tgtaacccggaaacggtctcgaccgattacgacacctctgaccgcctctactttgagccg
gtcacgctggaagatgtgctggagattgtgcgcatcgagcagccaaaaggcgtcatcgta
cagtatggcggtcagaccccgctgaaactggcgcgtgcgctggaagccgcaggcgtaccg
gttatcggcaccagcccggattctattgaccgtgcggaagaccgtgaacgtttccagcag
gcggttgatcgcctgaaactgaagcaaccagctaacgccacggtagcgacgctggagcag
gcagtcgagaaagcggctggcctgggttatccgctggtggtgcgtccttcctatgtactg
ggtggccgtgccatggagatcgtctacgacgagatcgacctcagacgttacttccagacg
gcagtctcggtttccaatgatgcgccggtactgctggatcgcttcttggatgatgctgtc
gaagtggatgtggatgcgatttgcgacggtgagcgggtgctgattggcggcattatggaa
cacattgagcaggctggtgttcactccggtgactccgcctgttcactgccggcctacacg
ctgaatcaggagattcagaatgtgatgcgccagcaggttgagaaactggcgtttgagctg
aacgttcgtggcctgatgaacgttcagttcgcggtgaaagacaacgaagtctatctgatc
gaagtgaacccacgtgcggcgcgtaccgttccgttcgtttctaaagcgaccggtgtaccg
ctggcgaaagtggctgcgcgcgtgatggcaggtaaaacactggcagagcagggcgtgacg
gaagaggtgatcccgccttactactcggtcaaagaagtggtgctgccgttcaacaagttc
cagggcgttgacccgattctgggtccagaaatgcgctccactggtgaagtcatgggtgtg
ggccgcacgttcgctgaggcgttctccaaagcgatgctgggtgcccagagcaatatgaag
aagtcaggccgtgcgctgctgtctgtgcgtgaaggcgacaagaaacgtatcgtcgacctg
gccgcgaagctgcagaagtttggtttcgaactggatgcgactcacggcaccgcggtggtg
ctgggcgaagcgggcatcaacccgcgcctggtcaacaaggtgcatgaaggacgtccgcac
attcaggaccgcctgaagaatggcgagtatagctacatcgtcaatacaacggcgggtcgt
caggcgattgaagattcgaagctgattcgccgcagcgcactgcagtataaagtgcattac
gacaccacgctgaacggcggcttcgccaccgcgatggcgctgaatgcagacccgacggaa
caggttatctccgttcaggaaatgcatgcccagataaaggcgatgtaa
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