Pantoea alfalfae: K6R05_15990
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Entry
K6R05_15990 CDS
T09440
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_15990 (radA)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K6R05_15990 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
RecA
SLFN-g3_helicase
GvpD_P-loop
ABC_tran
AAA_14
NTPase_1
AAA_24
AAA
AAA_16
Rad51
nSTAND3
cobW
AAA_30
Zeta_toxin
Viral_helicase1
NACHT
AAA_29
DZR
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QZX95226
LinkDB
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Position
complement(3398458..3399840)
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AA seq
460 aa
AA seq
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MAKAAKRAFVCNECGADYPRWQGQCSACHAWNTITEVRIAASPAAARNERLSGYAGSAGT
SRVQKLSEISLEALPRFSTSFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQVMCRLS
EGMKTLYVTGEESLQQVAMRAHRLGLPTENVNMLSETSIEQICLIAEQEQPQLMVIDSIQ
VMHMAEIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGMREVSNPSAIFLSRGEEITSGSSV
MVLWEGTRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALMLSMVSSLRDRPLPQDLVIFGEVGLAGEIRPVPSGQERIAEAA
KHGFKRAIVPAGNAPKKPIAGMQVFSAKKLADALAILDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaagcggcaaaacgcgcatttgtctgtaacgaatgtggcgcagattacccacgc
tggcaggggcaatgcagcgcctgtcacgcctggaacaccatcaccgaggtgcgcatcgcc
gcctcgcccgccgctgcgcgtaacgagcgcctgagtggttatgccggcagcgctggcacc
agccgggtgcagaagctctctgaaatcagcctggaggcgttaccgcgcttctcgaccagc
ttcaaagagtttgaccgggtactgggcggcggcgtcgtgccgggcagcgctattctgatt
ggcggcagtccgggcgcgggcaaatccacgctgctgctgcaggtgatgtgccggttgtcc
gaagggatgaaaaccctttacgtcaccggtgaagagtcactgcaacaggtggcgatgcgc
gcccatcgtctgggattacccaccgaaaatgtcaatatgctgtcggaaaccagcattgag
cagatctgcctgatcgccgagcaggagcagccgcaactgatggtgatcgactcgatccag
gtcatgcacatggcggagatccagtcatcgccgggcagcgttgctcaggtgcgtgaaacc
gccgcttacctgacgcgcttcgccaaaacgcgcggcgtggcgatcatcatggtcggccac
gtcaccaaagatggttcgctggccgggccgaaagtgctggagcactgcatcgactgttca
gtgctgctggatggcgatgctgattcccgcttccgcacgctgcgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggtgtgtttgccatgaccgagcagggcatgcgtgaagtc
agcaacccgtcagctattttcctgtcgcgcggcgaagagatcacctcgggcagttcggtg
atggtgctgtgggagggaacgcgaccgctgctggtggagattcaggcgctggtcgatcat
tcgatgatgggcaatccacgccgcgtggcagtgggtctggagcagaaccgcctggcgatt
ctgctggcagtattgcaccgtcacggcggattgcagatggccgatcaggatgtattcgtt
aacgtcgtgggcggcgtcaaagtcaccgaaaccagtgcagacctggcgctgatgctgtcg
atggtgtcgagcctgcgcgatcgtccgcttccgcaggatctggtgatcttcggcgaagta
ggactggccggtgagatccgtccggtgcccagcgggcaggagcgcatcgctgaagcggcg
aagcatggcttcaaacgcgccattgtgccggcagggaatgcaccgaaaaaaccgattgcc
gggatgcaggttttcagcgcgaagaagctggccgatgcgctggcgattctggacgatctg
taa
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