Pantoea alfalfae: K6R05_16165
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Entry
K6R05_16165 CDS
T09440
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
palf
Pantoea alfalfae
Pathway
palf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6R05_16165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_16165
02044 Secretion system [BR:
palf02044
]
K6R05_16165
Transporters [BR:
palf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K6R05_16165
Secretion system [BR:
palf02044
]
Type I secretion system
Adhesin protein transporter
K6R05_16165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
DUF2700
AAA_25
AAA_15
G-alpha
AAA_23
AAA_5
ERAP1_C
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QZX95258
LinkDB
All DBs
Position
3442716..3444929
Genome browser
AA seq
737 aa
AA seq
DB search
MIMNTISDSENASAQPHAKKAYTPWLDALLLVAKHYRLDGSPERVKGEAEWHMQHLSQDA
LIENMARQLGLLVIFDAFDPDQLDPWRMPLIVDFGPRGVGVITTVGEDGQVSVMLSGEKQ
LQTTLSIEDLSQHAQRVLLAKPESSVPDARVDDYIKPHRADWLWQTILREWPAYVNVMFA
SLISNVLGLSAMLFTMQVYDRVIPSQSVPSLWVLFGGVMIALTCVFVMRIIRTHISDAAG
KSADLRISDRVFGHALRIRNDQRPKSTGSFIAQIRELEQIRELITSTTISAIADLPFLII
FLFILWLLGGWLVLVPLAAIPLIVIPGLLAQGSLAKLSKATMRESAVRSAMLVETVQGMD
DIKLLRAEPYFQNQWNHLNEVISKSSQKQRFVSGLLMSWTSEVQTVAYVSVVLVGAFFAM
SGDLSTGVLIGCSMLASRMMAPLGQLAMIFGRWQQAKVAREGLENLLNSEVDQPERSIRI
HRPRINGEYALSDVIYRYDPNSPDPVLTVKKLTIKAGEKVALLGRNGSGKSTLLQLMAGL
LQPGEGVLLLDGVRLSSIDPLDVRRDVGLLTQNASLFYGTIRENLRLGMPLATEEEMLQA
LEISGALDFIQRLPEGMDYLLQEGGKGLSGGQRQQLLLARTLLRQPSVLLLDEPTAWLDD
AAEKHLIERLMTWMGNRTLIIATHRPAVLQLVDRIMLMDKGRIARDGSKAEMLVTRPEAS
AAPHQGNVNVKPKGAQA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaacacaatatctgacagcgaaaatgcatcagcacagcctcacgcgaaaaag
gcttataccccctggctcgacgcgctgctgctggtggcgaaacattaccgccttgatggt
tcacctgagcgggtgaaaggggaagcggaatggcacatgcagcacctttcacaggatgcc
ctgattgaaaatatggcgcgccagctcggcctgctggtcatttttgacgcgtttgacccg
gatcagctcgatccgtggcgcatgccgttgatcgtcgatttcggtcctcgcggcgtcggc
gtcatcaccacggtgggcgaggatggccaggtcagcgtgatgctgagcggtgaaaaacag
ctgcagaccacgctgagtattgaagatctgtcgcagcatgcacagcgcgtactgctggcg
aagccggagtcttccgtgccggatgcgcgggtggatgactatattaagccacatcgtgct
gactggctgtggcagaccattcttcgtgagtggccagcctatgtaaacgtgatgtttgcg
tcgctgatctccaacgtgctgggcctctccgcgatgctcttcaccatgcaggtgtatgac
cgggtgatcccttcccagtcggtgccctctctctgggtgctgtttggcggcgtcatgatc
gccctgacctgcgtgtttgtgatgcgtatcatccgcacgcatatctctgatgcagccggt
aaaagcgcggacctgcgcatctccgatcgcgtctttggtcacgcgctgcggatccgtaac
gatcagcggcccaaatcgaccggatcgtttattgcccagatccgcgagctggaacagatc
cgtgaactgattacctcgaccaccatttcagcaattgccgatctgccttttttaatcatc
ttcctgtttatcctctggttactgggtggatggctggtactggttccgctggcggcgatt
ccgctgattgtgattccgggcctgctggcgcagggttcgctggcgaagctctccaaagcg
accatgcgcgagtccgcagtgcgcagcgctatgctggttgagaccgtacagggcatggat
gacatcaagctgctgcgcgcagagccctactttcagaaccagtggaatcacctgaatgag
gtgatcagtaaatcttcacagaagcagcgttttgtcagcggcctgctgatgagctggacc
agtgaagtccagaccgttgcctatgtcagcgtggtgctggtgggtgctttttttgccatg
agcggtgacctctctaccggcgtgttaattggctgctcgatgctggcgtcacgcatgatg
gcaccgctgggccagctggcgatgatatttggccgctggcagcaggccaaagtggcgcgc
gaaggactggagaacctgctcaacagcgaggtcgatcagccagagcgcagcatccgtatt
catcgcccgcgcattaacggcgaatatgcgctctctgacgttatctatcgctacgacccg
aactcccctgatccggtgctgacggtgaaaaagctgaccattaaagccggtgagaaagtg
gcgctgctggggcgtaacgggtccggtaaatcaacgctgttgcagctgatggcaggtctg
ttgcagccgggtgaaggtgtcctgctgctggatggcgtgcggctttcctccattgacccg
ctggatgtaaggcgtgacgtcgggctgctgacccagaacgcatccctgttctacggcaca
attcgcgagaacttacgcctgggcatgccgctggcgacagaagaggagatgcttcaggcc
ctggagatcagcggcgcactcgactttattcagcgcctgccggaaggcatggattatctg
ttacaggagggtggcaaaggcttgtctggcggacagcgtcagcagctgttgctggcacgc
accctgctccgccagccaagcgtgctgttgctggatgaacctaccgcctggctggatgat
gccgctgaaaaacatctgattgagcggctgatgacgtggatgggcaaccgtacgctgatt
atcgccacgcatcgcccggcggtattgcagctggttgatcgcatcatgctgatggataaa
ggcaggattgcgcgggatggctcaaaagcagagatgctggtcacccggcccgaagccagt
gccgcgccgcatcagggcaacgtcaatgttaaaccgaagggagcacaggcatga
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