Pantoea alfalfae: K6R05_16420
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Entry
K6R05_16420 CDS
T09440
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
palf
Pantoea alfalfae
Pathway
palf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6R05_16420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palf02000
]
K6R05_16420
Transporters [BR:
palf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6R05_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QZX95303
LinkDB
All DBs
Position
complement(3505954..3509055)
Genome browser
AA seq
1033 aa
AA seq
DB search
MNLTRLFIFRPVATLLLTLAILLPGALGYRLLPVAPLPQVDFPTIMVSASLAGASPETMA
ATVATPLERSLGQIAGISEMTSSSSQGSSSIILQFELDRDINGAARDVQAAINAARSLLP
SAMASLPTYRKANPSDAPIVMLALTSATRTPGELYDLAESKIEQAMGQVQGVGEVSLMGS
ALPAVRIDLQPLKLTHYGISLETVRAAVADSTTNLPKGILQGSDQSWLVDSNGQLDKAAS
YRDLIITWQQGKAVRLSDVATVYDSVEDRYQAGFLNATPAVMIGIKRQAGANMLETIDAI
KAQLPLLEKSLPADSQLKVVVDRSPGVRASLYDTEETLLIAVLLVIAVVFIFLRNLQAVI
IPALALPVSLIGTCAVMYLLGYSLDNLSLMALIISTGFVVDDAIVVLENITRHIERGLSP
LRAALRGAQEVSFTVLSMTVSLIAVFIPILLMGSIVGRLFREFAVTLTVSLLISLFVSLS
LTPMLCARLLKPKPPVSKRPHPLYQFIENQLNRLLAAYGRGLAWVMRHQKLTMLSLLLTV
LLNVFLFTVVQKGFFPNQDTGLLMGALRADQNISFQAMRPKMLMFTKIIQEDPAVDSVMS
SMGSGMFGSRNSANFFVRLKDFDQRDATATEVANRLTRKTSHIAGAQMFLMAAQDLHIGG
RSANATYQYSLQADDLDLLRIWTPKVQAALAAIPGLNSVDSDSQTGGQEVALTIDRDRAT
RLGVNVKMLDTLLNNAFSQRQIATLYHTLNQYHVVMSLQDSDTANPETLQQLYVINDSGD
RVPLSAFARFSGGNAPLSVAHQGQSATSTVAFNLNEGVSLEQAQLLIKQAMAKLGLPSTL
HAGFAGTAAAFSQLTATMPWLILAALAAVYLVLGVLYESYIHPLTILSTLPSAGVGALLL
LLLTNTQLTVIALIGIILLIGIVKKNAIMMIDFAIDAERRQCMSPQQAITQACLMRFRPI
MMTTLAAFFGALPLALGSGGDADLRSPLGIAIAGGLALSQLLTLFTTPVVYLWLDRLGRA
TQRQWRRLRPTES
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacccggctgtttatctttcgtccggtggcgacgctgctgctgacgctggcg
atcctgctgcccggcgcgctgggttaccggctgctgccggtggcaccgctgccgcaggtc
gattttccgaccatcatggtcagcgccagcctggcgggggccagcccggagaccatggcg
gctaccgtcgcgaccccgctggagcgttcgctcgggcagattgccggtatcagtgagatg
acttccagcagttcgcagggctccagcagtattatcctgcagtttgagctggaccgcgat
atcaacggcgcggcgcgcgacgtgcaggcggcgattaacgcggcgcgcagcctgctgccc
agcgcaatggcctcgctgccgacttatcgcaaagccaacccgtcagatgcgccgattgtg
atgctggcgctgacctctgctacccgcacgcccggcgagctttacgatctggcggagagc
aaaatcgaacaggcgatggggcaggtacagggcgtcggcgaagtgtcgctgatgggcagc
gccttacccgcggtgcggattgatctgcagccgctgaagctgacccactacggcatctcg
ctggagacggtgcgtgccgccgtcgccgacagcaccaccaatctgcccaaagggatctta
cagggcagtgaccagtcgtggctggtggacagcaacggccagctggataaggccgccagc
taccgtgatctgatcatcacctggcagcagggcaaggcggtgcggctgagcgacgtcgcc
acggtctatgactcggttgaagatcgctatcaggcgggattcctcaatgccacgcctgcg
gtgatgatcggcattaaacgtcaggcgggcgctaacatgctggaaaccatcgacgcaata
aaagcgcagttgccgctgctggaaaagagcctgcctgctgacagccagctgaaggtggta
gttgaccgctcaccgggcgtgcgcgcctcgctgtatgacaccgaagagacgctgctgatc
gcggtgctgctggtcatcgcggtggtgtttattttcctgcgcaatctgcaggcggtgatc
attccggcactggcgctgccggtgtcgctgatcgggacctgtgcggtgatgtacctgctg
ggttacagcctggataatctgtcgctgatggcgctgattatctccaccggctttgtggtg
gatgatgcgattgtggtgctggaaaacatcacccgtcacattgagcgcgggctgagtccg
ctgcgggcggcgctgcgtggggcgcaggaggtgagtttcactgtgctgtcgatgaccgta
tcgctgatcgcggtgttcatcccgattctgttgatgggcagcattgtcgggcggctgttc
cgcgaatttgctgtcacactcaccgtgtcgctgctgatctcgctgtttgtctcgctcagc
ctgacgccgatgctttgcgcacgcctgctgaaaccgaagccgcccgtgagcaagcggccg
catccgctttatcagtttattgaaaaccagctaaatcgcctgctggccgcctacgggcgc
gggctggcctgggtgatgcgccatcagaaactgaccatgctcagtctgctgctgaccgtg
ctgctgaatgtttttctgttcaccgtggtgcagaagggctttttcccgaatcaggacacc
gggctgctgatgggcgcgctgcgtgccgatcagaacatttcgtttcaggcgatgaggccg
aaaatgctgatgttcacgaagatcattcaggaagacccggcggtcgatagcgtaatgtcg
tcgatgggcagcgggatgtttggctcccgcaacagcgccaacttctttgtgcgacttaaa
gattttgaccagcgcgatgccacggctaccgaagtcgccaaccggctgacgcgtaaaacc
agccacatcgccggggcgcagatgttcctgatggcggcgcaggatctgcacattggcgga
cgcagcgctaacgccacgtatcagtacagcctgcaggcagacgatcttgatctgctgcgg
atctggacgccgaaagtgcaggcggcgctggcggcgatccccgggctcaacagcgtagac
tccgactcgcagaccggcgggcaggaggtggcgctgaccatcgaccgcgaccgcgcgacc
cggctgggcgtcaatgtgaagatgctcgatacgctgctgaacaatgcgttcagccagcgg
cagatcgccacgctctatcacactctgaatcagtatcatgtggtgatgtcgctgcaggac
agcgacaccgcgaatccggagacgcttcagcagctctatgtgattaacgacagcggtgac
cgcgtgccgctttccgcctttgcccgcttcagcggcggcaatgcaccgctgtcggtggcg
catcagggccagtccgcgaccagtaccgtagcattcaacctcaatgagggcgtttcgctg
gagcaggcgcagttgctgattaaacaggcgatggcgaagctgggcctgccgtcgaccctt
catgccggttttgccggtactgccgccgccttttcccagctgaccgccaccatgccgtgg
ctgattctggcggcgctggcggcggtctatctcgtgctcggcgtgctctacgagagctac
atccatccgctgaccattctctcgacgctgccgtctgcgggcgtcggcgcgctgttactg
ctgctgctgaccaacacgcagctcacggtgatcgcgctgattggcatcatcctgctgatt
ggtatcgtgaaaaagaacgccatcatgatgatcgattttgccatcgacgcggagcggcgg
cagtgtatgtcgccgcagcaggcgattacccaggcgtgcctgatgcgcttccggccgatc
atgatgactacgctggccgcctttttcggcgcgttgccgctggcgctgggcagcggcggg
gatgccgatctgcgcagtccgctggggatcgctatcgcgggcggactggcgctcagccag
ctgctgacactgtttaccacaccggttgtttatctttggctcgaccgtctgggccgtgcc
actcaacgtcaatggcgtcgtctgcgccctacggaatcctga
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