Pantoea alfalfae: K6R05_16535
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Entry
K6R05_16535 CDS
T09440
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
palf
Pantoea alfalfae
Pathway
palf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6R05_16535 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palf03019
]
K6R05_16535 (pnp)
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_16535 (pnp)
Enzymes [BR:
palf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K6R05_16535 (pnp)
Messenger RNA biogenesis [BR:
palf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K6R05_16535 (pnp)
Transfer RNA biogenesis [BR:
palf03016
]
Prokaryotic type
tRNA degradation factors
K6R05_16535 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QZX95324
LinkDB
All DBs
Position
complement(3536002..3538137)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALALSGLPFNGPIGSARVGYINDQYVLNPTADELKQSRLDLVVA
GTQNAVLMVESEAEILSEEQMLGAVVFGHDQQQIVIENINALVAEAGKPRWDWQPEAANT
PLISRVAALAEARISDAYRITDKQERYAQVGVIKDETIAALLAEDDTLDGSEIGDIVHSL
EKTVVRTRILNGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTTR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQEALNQAKGARLHILGVMEQA
ISTPRTEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATESKPQTEEAAAVTTPDAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgcaaattccaatatggtcaacataccgtcacgctggaaacc
ggcatgatggctcgccaggcgacagccgctgtgatggtgagcatggacgatactgcagtg
ttcgtcactgttgtaggtcagaaaaaatctaaaccaggtcaggacttcttcccactgacc
gtgaactatcaggagcgtacttacgctgctggtcgtatcccaggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatttcgcgtctgattgaccgcccgattcgt
ccacttttcccggaaggctttgttaacgaagtccaggttattgccaccgtggtgtctgtc
aacccacaggttcatccagacatcgttgcgatgatcggtgcttctgctgcactggcgctt
tctggtctgccgttcaatggcccgattggctctgcacgtgtaggttacatcaacgatcaa
tatgttctgaacccaaccgcagatgagctgaaacagtctcgtctggatctggttgttgcc
ggtacgcagaatgccgttctgatggttgaatctgaagctgagatcctgtcagaagagcag
atgctgggcgccgtggtctttggccatgaccagcagcagatcgttatcgaaaacatcaat
gccctggttgctgaagcaggcaaaccgcgctgggactggcagccagaagccgccaatacc
ccgctgatttctcgtgttgctgccctggcagaagcgcgcatcagtgatgcttaccgcatc
actgacaagcaggagcgttacgcgcaggttggcgtcatcaaagacgaaaccattgctgcg
ctgctggctgaagatgacacgctggatggttcagaaatcggcgacatcgtgcatagcctc
gaaaaaaccgttgttcgtacccgcatcctgaatggcgagccacgtatcgatggccgtgaa
aaagatatgatccgcggtctggacgtgcgtactggcgtattgccacgtactcacggttca
tcactgttcacccgtggtgaaacgcaggcactggttacggcaacgctgggtactacccgt
gatgcgcagaacctggatgagctgatgggcgaacgtaccgacagcttcctgttccattac
aacttccctccatactctgtcggtgaaaccggcatggtcggttcgccgaagcgtcgtgag
attggtcacggtcgtctggcgaagcgcggtgtgttagcggtaatgcctaaagcggaagat
ttcccttacaccgttcgcgtcgtgtctgaaatcaccgaatcaaacggctcctcttcaatg
gcctctgtctgtggtgcctcactggcgctgatggatgcaggtgtgccaatcaaagccgcc
gttgccggtatcgcgatgggtctggtgaaagaagatgagaagtttgtggttctgtctgat
atcctgggcgacgaagatcatctgggcgacatggacttcaaggtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacgcgtgaaatcatgcag
gaagccctgaaccaggccaagggtgcgcgtctgcacattctgggcgtaatggaacaggct
atcagcacaccgcgtactgagatttctgaatttgcaccgcgcatctacaccatcaaaatc
agctctgacaagatcaaagatgtgatcggtaaaggcggctcagtgattcgtgcactgact
gaagagaccggcaccacgattgaaatcgaagatgacggcaccgtgaaaatcgctgcgacc
gatggtctgaaagcgaaagaagccattcgtcgtattgaagagatcactgcagaaatcgaa
gtgggccgcatttacagtggtaaagtgacccgtatcgttgatttcggtgccttcgttgcc
atcggcggcggtaaagaaggtctggttcacatttcacaaatcgctgataagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtgccggttaaggtgatggaagttgat
cgccagggtcgcgtacgtctgagcatcaaagaagcgacagaatctaagccgcagactgaa
gaagctgcagcggtgaccacgcctgacgctgaataa
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