Pantoea alfalfae: K6R05_16545
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Entry
K6R05_16545 CDS
T09440
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palf03016
]
K6R05_16545 (truB)
Enzymes [BR:
palf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K6R05_16545 (truB)
Transfer RNA biogenesis [BR:
palf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6R05_16545 (truB)
Prokaryotic type
K6R05_16545 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QZX95326
LinkDB
All DBs
Position
complement(3538849..3539793)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNIVQTRLVSFSQVDLDSALESFRGDTL
QVPSMFSALKHQGRPLYEYARQGIVIEREPRPITVYELQFIRWQDNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRVQVARYPYERMVTLEQLNTLLAEATEAGTPLETQLDPL
LLPMDSPASDFPEVNIPPAVADFFRQGQPVQASNAPAQGLVRVSEGEARKFIGMAEIADD
GRLAPRRLVVEYQD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtccgcgtcgtcgcggtcgcgacgtccatggcgtgttgttgctggataagcca
caaggcgtttcgtcgaatgatgtcctgcagaaagtgaagcgtatctttaacgctaatcgc
gcaggccataccggcgcgcttgatccactggccaccggcatgttgccaatctgcctgggt
gaagcgaccaagttttcgcagtatctgctcgattccgacaaacgctaccgtgtgattgcc
cgactgggcgagcgcactgacacgtcagatgcggatggcaatatcgtgcagacgcgtctg
gtcagcttcagtcaggtcgatctggatagcgcccttgagagcttccgcggcgatacgctg
caggtgccatcgatgttttcggcgctgaagcatcagggtcgtccgctgtatgaatatgcg
cgtcagggcattgtgattgagcgtgaaccgcgtcccatcacggtctatgagctgcaattt
attcgctggcaggataatgagctggagctggaaattcactgctccaaaggcacctatatc
cgtaccatcatcgatgacctgggtgaaaagctgggatgcggtgcgcatgtcatcatgctg
cgacgtgtacaggttgcccgttatccgtatgaacggatggtgacgctggaacagctcaac
acgctgctggcggaagccacagaagcgggcaccccactggaaacgcagctcgatccgctg
ttgttgccgatggacagcccggcctctgatttccctgaagtgaatatcccacccgccgtg
gcagattttttccgtcagggacagccggtacaggccagcaacgcgcctgcgcaggggctg
gtcagagtatcggaaggcgaagcgcgtaagtttatcggtatggcagaaattgccgatgat
ggccgtcttgcgccacgtcgtttagtggttgagtatcaggattaa
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