Pantoea alfalfae: K6R05_16710
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Entry
K6R05_16710 CDS
T09440
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K07724
Ner family transcriptional regulator
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palf03000
]
K6R05_16710
Transcription factors [BR:
palf03000
]
Prokaryotic type
Helix-turn-helix
Other families
K6R05_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_35
HTH_26
HTH_38
HTH_20
HTH_IclR
HTH_3
MarR_2
DprA_WH
HTH_31
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QZX95355
LinkDB
All DBs
Position
3575329..3575613
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AA seq
94 aa
AA seq
DB search
MQERKEDWHPADIIAALHKRGMTLAALSRAAGLSSSTLANALTRPWPKGEWLIADAIKVH
PSEIWPSRYYDPDTNCLLDRRKRIRTPADQTDNA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagaaaggaagactggcacccggctgacattatcgcggcgctgcataagcgt
ggtatgacactggcggcgctgtcacgcgcagcaggcctgagttcatcaacgctggctaat
gcactgacgcgtccctggcccaaaggcgaatggctgattgccgacgcgattaaggttcat
cccagtgagatctggcccagccgctattacgatcccgatacaaactgtctgctggatcgc
agaaaacgtatccggacgcctgccgatcagacggataatgcctga
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